Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bamb_0867 |
Symbol | |
ID | 4310872 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria AMMD |
Kingdom | Bacteria |
Replicon accession | NC_008390 |
Strand | - |
Start bp | 952476 |
End bp | 953069 |
Gene Length | 594 bp |
Protein Length | 197 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 638148668 |
Product | chorismate mutase |
Protein accession | YP_772760 |
Protein GI | 115350921 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1605] Chorismate mutase |
TIGRFAM ID | [TIGR01806] chorismate mutase, putative |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.00756442 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAAACAAG CCATTCGTGC CAGCGTCGCT GTCGCCGCGC TCGGCGTCGC CCTTCTTTCG TCACCGCCCG TCGCGTTCGC CGACGGCGAC GACACCGCGC TCACCAACCT CGTCGCGCTC GCGTCGCAGC GGATCGCGCT TGCCGAACCC GTCGCACGCT GGAAATGGGC GAACCACAAG GCGATCGAGG ACCAGCCGCG CGAAGCCGCA CTGCTCGCAT CGGTGGAGAA GCGCGCCGCA CAGTCGGGCG TGGATCCGGC GTTCGCCCGG ACGTTCTTCG AGGATCAGAT CGCCGCGAGC AAGGACGTGC AGAACGCGCT CTTTGCCACC TGGCGCGCGA CGCGGCCGCC CGAAGGCACG CCGCCCGACC TCGCGACCAG CACGCGGCCG GCGCTCGACC AGCTCACGCA AAAGATGCTG GCCGGCCTCG GACGAATCGC GCCGCTGCGC GACGCGCCCG ATTGCCAGGC GCGGCTTGCC CGCAGCATCG CGAACTGGAA GACGCTCACC CGCTACGACG CGAGCCGCTC GCAGGCGCTC GACACCGCGC TGTCGCACGT GTGCTCGGCC GGCGGCGCCA GCGCGATCGG CTGA
|
Protein sequence | MKQAIRASVA VAALGVALLS SPPVAFADGD DTALTNLVAL ASQRIALAEP VARWKWANHK AIEDQPREAA LLASVEKRAA QSGVDPAFAR TFFEDQIAAS KDVQNALFAT WRATRPPEGT PPDLATSTRP ALDQLTQKML AGLGRIAPLR DAPDCQARLA RSIANWKTLT RYDASRSQAL DTALSHVCSA GGASAIG
|
| |