| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_0849 |
|---|
| Symbol | |
|---|
| ID | 4308516 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria AMMD |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008390 |
|---|
| Strand | + |
|---|
| Start bp | 935296 |
|---|
| End bp | 936294 |
|---|
| Gene Length | 999 bp |
|---|
| Protein Length | 332 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 638148646 |
|---|
| Product | lipopolysaccharide heptosyltransferase I |
|---|
| Protein accession | YP_772742 |
|---|
| Protein GI | 115350903 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0859] ADP-heptose:LPS heptosyltransferase |
|---|
| TIGRFAM ID | [TIGR02193] lipopolysaccharide heptosyltransferase I |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.727875 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGAAACGCA TCCTCATCGT GAAAGTGACG TCGCTCGGCG ACGTCGTCCA GACGCTGCCC
GTCGTCGCGG ACCTCCATCG CGCCTTCCCG GGTGTGACGG TCGACTGGGC CGTCGACGAA
TCCTGCGCGG AGGTCGTGCG CTGGCACCCG GGCGTGACCA ATGTGCTTTG CGCGCCGCTG
CGGCGGTTCA AGAAGATGCG CAACGGCGGC GACCTGAAGG CGATCTCCGC GTCGATCGGC
GCGCTGCGCG CGCATCGCTA CGATGCGGTC ATCGATCTGC ACGGCGTGTA CAAGAGCGCG
ATCATTTCGG TACTCGCGCG CGCCGCGCGC CGCGTCGGCT ACCAGACGCA GGATCTCGGC
GAGACGGGCG CCCGTTTTGC ATATTCGCAT CGCTTCGGCC CCCGGCCGGA CTGCGACGCA
TGGCACGGGA TGCGCGTGAG CGCCGGCGAG GCGCTGGGCT ATGTGCCCGA AGGCATCGCC
ACGTACGGGA TCGTCCCGCC GCAGGACGCG AGCCTGCCGC CCGCCGTGAC CGACGGCACG
CCGTTCATGC TGCTGTTTCA CGCGACGTCC AATCCGGACA AGAAATGGCC GGCCGACCAC
TGGGCCGCGC TGGCCACCCG GATGATGGCG CGCGGCGTGC GCGTGCTGTT GCCGTGGGGG
TCGCCCGCCG AACATGACGA CGCGAAGGAT ATCGCCGCGC GCGCGCCGGG CGCGATCGTG
CTGCCGGCGA TGTCGGTGCG CGAACTCGGC GCGGCCCTCG GCCGGGCCGC GCTCGTGGTG
GGCGTCGATA CCGGCTTCGT GCACATGGCG CACGCGCTGC AGCGGCCGAC CGTGATGATT
TTCGTCGCGA CGTCGCGCCA CCATTGCGGG ATCGGCGGGG CACCGAATGC GCTGTCGATC
GGCGAGCCGG GCGCGCCGCC GTCGGTTGCG CAGGCACTCG ATGCGATCGA CGCGGTCGCA
CCGGCCTATG CCGCACGGCC CGCGCAGCTG ACGGCCTAG
|
|---|
| Protein sequence | MKRILIVKVT SLGDVVQTLP VVADLHRAFP GVTVDWAVDE SCAEVVRWHP GVTNVLCAPL
RRFKKMRNGG DLKAISASIG ALRAHRYDAV IDLHGVYKSA IISVLARAAR RVGYQTQDLG
ETGARFAYSH RFGPRPDCDA WHGMRVSAGE ALGYVPEGIA TYGIVPPQDA SLPPAVTDGT
PFMLLFHATS NPDKKWPADH WAALATRMMA RGVRVLLPWG SPAEHDDAKD IAARAPGAIV
LPAMSVRELG AALGRAALVV GVDTGFVHMA HALQRPTVMI FVATSRHHCG IGGAPNALSI
GEPGAPPSVA QALDAIDAVA PAYAARPAQL TA
|
|---|
| |