| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_0828 |
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| Symbol | |
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| ID | 4311559 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008390 |
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| Strand | + |
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| Start bp | 914140 |
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| End bp | 915387 |
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| Gene Length | 1248 bp |
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| Protein Length | 415 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 638148624 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_772721 |
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| Protein GI | 115350882 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1653] ABC-type sugar transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.00532301 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAGTTC GCTCGATCAT GGGCGCGCTC TGCGCCGCGG GTCTGATGGC TGGCGCCGTG
GCGGCGCAGG CGGCCGAGAA CGTAACGGTG CTGCACTGGT GGACCTCGGG CGGCGAGTCG
AAGGCCGTCG GCGTGCTGAA GGACGACCTC CAGAAGCAGG GCTACGTGTG GAAGGACTTC
GCGGTCGCGG GCGGCGCGGG CGCGGCGGCC ATGACCGCGC TGAAGACCAA GGTGATCAGC
GGCGACTCCC CGTCGGCCGC GCAGATCAAG GGCCCGCTGA TCCAGGACTG GGCCGATCAA
GGCGTGCTCG TCAACATCGA TTCCGCTGCC GGCGACTGGA AGCAGAACCT GCCGCCGGAA
ATCGACAAGA TCATCAAGTA CAAGGGCCAT ACCGTCGCCG CGCCGTTCTC GGTGCACCGC
GTGAACTGGC TCTATATCAA CAAGGCCGCG CTCGACAAGA TCGGCGCGAA GGTGCCGACG
ACCTGGCCCG AGTTCTTCGC GGTGGCCGAC AAGCTGAAGG CCGCGGGCAT CCAGCCGGTC
GCGATGGGCG GCCAGCCGTG GCAGGACCTG ACGCTGTGGG AAGACGTCGT GCTGTCGCAG
GGCCCGGCGT TCTACAAGAA GGCGCTCGTC GATCTCGACC AGGCCACGCT GAATTCGCCG
CAGATGGTGT CGGTGTTCGA CACGGTGCGC AAGATCCAGG GCTACTTCGA CACGGGCCGC
AACGGCCGTG ACTGGAACCT CGCGACCGCG ATGGTGATCA ACGGCAAGGC CGGCATGCAG
TTCATGGGCG ACTGGGCGAA GGGCGAGTTC GAGAACGCGG GCAAGAAGGC CGGCAAGGAC
TATATCTGCG CAGCGGTGCC GGGCACGGCG AACTCGTACA CGTTCAACGT CGACTCGTTC
GTGTTCTTCC AGCAGAAGGG CCAGAAGGAC GCGACGCCGG GCCAGCTCGC GCTCGCGAAG
ACGATCATGA CGCCGGCCTT CCAGGAGCAG TTCAGCCTGC TGAAGGGTTC GGTGCCGGTA
CGCCTCGGCG TGAAGATGGA CAAGTTCGAC GACTGCGCGA AGAAGTCGTA CGCCGACGAG
CAGACCGCGA TCAAGTCGGG CGGCTTCGTG CCGTCGCTCG CGCACGGAAT GGCGCAGGGC
GACGCGACGG CCGGCGCGAT CACCGACGTC GTGACGAAGT TCATGAACTC GCAGCAGGAT
TCGAAGAGCG CGGTCGCCGC GCTCGCGAAA GCCGCGAAGG TGAAGTAA
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| Protein sequence | MKVRSIMGAL CAAGLMAGAV AAQAAENVTV LHWWTSGGES KAVGVLKDDL QKQGYVWKDF
AVAGGAGAAA MTALKTKVIS GDSPSAAQIK GPLIQDWADQ GVLVNIDSAA GDWKQNLPPE
IDKIIKYKGH TVAAPFSVHR VNWLYINKAA LDKIGAKVPT TWPEFFAVAD KLKAAGIQPV
AMGGQPWQDL TLWEDVVLSQ GPAFYKKALV DLDQATLNSP QMVSVFDTVR KIQGYFDTGR
NGRDWNLATA MVINGKAGMQ FMGDWAKGEF ENAGKKAGKD YICAAVPGTA NSYTFNVDSF
VFFQQKGQKD ATPGQLALAK TIMTPAFQEQ FSLLKGSVPV RLGVKMDKFD DCAKKSYADE
QTAIKSGGFV PSLAHGMAQG DATAGAITDV VTKFMNSQQD SKSAVAALAK AAKVK
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