Gene Bamb_0820 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_0820 
Symbol 
ID4309885 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008390 
Strand- 
Start bp904290 
End bp904919 
Gene Length630 bp 
Protein Length209 aa 
Translation table11 
GC content67% 
IMG OID638148616 
Productriboflavin synthase subunit alpha 
Protein accessionYP_772713 
Protein GI115350874 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0307] Riboflavin synthase alpha chain 
TIGRFAM ID[TIGR00187] riboflavin synthase, alpha subunit 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTTACCG GAATTGTCGC GGCCGTCGGC CGCATCGAAT CGATCAACCC GCTCGGCGCG 
TCGCCCGACG CGGGCGTGCG GCTGACGGTG CATGCCGGTG GGCTCGATCT GGCCGATGTC 
GCGCTCGGCG ACAGCATCGC GATCCAGGGC GCGTGCATGA CCGTCATCGA AAAGACCGAA 
ACCGGCTTCG ACGTCGACGT GTCGCGCGAA AGCCTGAACC GCACGGTCGG CCTCGCGCAA 
CCCGGCGAAG TGAACCTCGA GAAGGCGCTG CGCGCGCACG ATCGCCTCGG CGGGCACATC 
GTGTCGGGCC ACGTCGACGG CCTCGGCACC GTGACGCGCT TCGCGCCGGT CGGCGAATCG 
CACGAGCTGC GGATCGTCGC GCCGCGCGAA CTCGGCCGCT ATCTCGCATA CAAGGGCTCG 
ATCACGGTCA ACGGCGTGAG CCTGACCGTC AACGCGGTCG ACGATCGCGC GGACGGCTGC 
GAATTCTCGA TCAACCTGAT CCCGCATACG GTCGAGGTCA CGACACTGCG TCACGTGAAA 
GCCGGCGACA AGGTCAATCT CGAAATCGAC ATGATCGCGC GGTATGTCGA GCGGATGCTG 
TCGGCATCGC ACGGCGTGCC GCAGGACTGA
 
Protein sequence
MFTGIVAAVG RIESINPLGA SPDAGVRLTV HAGGLDLADV ALGDSIAIQG ACMTVIEKTE 
TGFDVDVSRE SLNRTVGLAQ PGEVNLEKAL RAHDRLGGHI VSGHVDGLGT VTRFAPVGES 
HELRIVAPRE LGRYLAYKGS ITVNGVSLTV NAVDDRADGC EFSINLIPHT VEVTTLRHVK 
AGDKVNLEID MIARYVERML SASHGVPQD