Gene Bamb_0818 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_0818 
Symbol 
ID4309883 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008390 
Strand- 
Start bp902259 
End bp903401 
Gene Length1143 bp 
Protein Length380 aa 
Translation table11 
GC content67% 
IMG OID638148614 
Productbifunctional 3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II-like protein 
Protein accessionYP_772711 
Protein GI115350872 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0108] 3,4-dihydroxy-2-butanone 4-phosphate synthase
[COG0807] GTP cyclohydrolase II 
TIGRFAM ID[TIGR00506] 3,4-dihydroxy-2-butanone 4-phosphate synthase 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGCTCG CCTCCACGCT CGACATCATC GCGGAGTTGA AAGCCGGCCG GATGGTGATC 
CTGGTCGACG AAGAAGACCG CGAAAACGAA GGCGACCTCG TGATCGCCGC CGAATTCGTC 
ACGCCGGAAG CGATCAACTT CATGGCCAAG TACGGCCGTG GCCTGATTTG TCTGACGTTG 
ACGCAGGAAC GCTGCAAGCA GCTGCACCTG CCGCTGATGA CCTACCGCAA CGGCACCCAG 
TACGGCACCG CGTTCACGGT CAGCATCGAA GCGGCCGAAG GCGTGACGAC CGGCATCTCG 
GCCGCCGACC GCGCGCACAC GATCGCCACG GCGGTCGCGC ACGACGTGCG TCCCGAGCAC 
ATCGTGCAGC CGGGCCACGT GTTCCCGATC ATGGCGCAGC CGGGCGGCGT GCTCGTGCGC 
GCCGGCCACA CCGAGGCCGG CTGCGACTTC ACCGCACTCG CCGGGCTCAC GCCGGCCGCG 
GTGATCTGCG AGGTCATCAA GGACGACGGC ACGATGGCGC GCCTGCCCGA CCTGCTCGAG 
TTCGCGAAGG AGCACAACCT GAAGATCGGC ACGATCGCCG ACCTGATCCA CTACCGCAGC 
CGCACCGAAT CGATCATCGA GCGGATCGCC GAGCGCACGA TGCAGACCGC GCACGGCACG 
TTCCGCGCGG TGCTGTACCG CGACCAGCCG ACCGGCTCGC CGCACATCGC GCTGGTGCGC 
GGCACGCCGT CGCCCGACGT CGATACGCCC GTGCGCGTGC ACGAGCCGCT GTCGGTCCTC 
GACCTGCTCG AGACGAGCAT CTCGACGCAC TCGTGGACGC TCGACGCCGC GATGCGCGAC 
ATCGCGGAAC GCGACCTCGG CGTGATCGTG CTACTCAACT GCGGCGACAC GAAGGAACAT 
CTGATCGACG TCTTCAAGGC GTTCGACGAG GAAGAAAAGG CCGCTGCGCT GAAGCGCCGG 
CCGGTCGATT TCAAGACGTT CGGCATCGGC GCGCAGATCC TGCGCGACGT CGGCGTCGGC 
AAGATGCAGG TGCTGTCGAA TCCGCGCAAG CTGGGCAGCA TGTCCGGCTA CGGCCTCGAA 
GTCACGGGCT TCATTCCGAT GCCCGGCGGC GAAGCCAAGT CCTGCCCGGC GTCCCACGCG 
TAA
 
Protein sequence
MTLASTLDII AELKAGRMVI LVDEEDRENE GDLVIAAEFV TPEAINFMAK YGRGLICLTL 
TQERCKQLHL PLMTYRNGTQ YGTAFTVSIE AAEGVTTGIS AADRAHTIAT AVAHDVRPEH 
IVQPGHVFPI MAQPGGVLVR AGHTEAGCDF TALAGLTPAA VICEVIKDDG TMARLPDLLE 
FAKEHNLKIG TIADLIHYRS RTESIIERIA ERTMQTAHGT FRAVLYRDQP TGSPHIALVR 
GTPSPDVDTP VRVHEPLSVL DLLETSISTH SWTLDAAMRD IAERDLGVIV LLNCGDTKEH 
LIDVFKAFDE EEKAAALKRR PVDFKTFGIG AQILRDVGVG KMQVLSNPRK LGSMSGYGLE 
VTGFIPMPGG EAKSCPASHA