Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bamb_0811 |
Symbol | |
ID | 4309876 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria AMMD |
Kingdom | Bacteria |
Replicon accession | NC_008390 |
Strand | - |
Start bp | 895162 |
End bp | 896718 |
Gene Length | 1557 bp |
Protein Length | 518 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 638148607 |
Product | UbiD family decarboxylase |
Protein accession | YP_772704 |
Protein GI | 115350865 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0043] 3-polyprenyl-4-hydroxybenzoate decarboxylase and related decarboxylases |
TIGRFAM ID | [TIGR00148] UbiD family decarboxylases |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAATACA AAGACTTACG CGATTTCATC CAGCGCCTCG AGGCGCTCGG CGAACTGCGG CGCGTCACGC AGCCCGTGTC GCCCGTGCTC GAAATGACCG AGCTGTGCGA CCGCGTGCTG CGCGCCGGCG GCCCGGCGCT GCTGTTCAAC GCCCCGCCCG GCAATGCGTT TCCTGTGCTC GGCAACCTGT TCGGCACGCC GCGCCGTGTC GCGCTCGGGA TGGGCGTCGA TGCGGGCGAC GACGCCGCGC TCGGCTCGCT GCGCGACCTC GGGCGGCTGC TGTCCGCGCT GAAGGAGCCG GATCCGCCGA AGAGCCTGAA GGACGCCGGC AAGCTGCTGT CGCTCGCGAA GGCCGTGTGG GACATGGCGC CGAAATCGGT GTCGTCGCCG CCGTGCCAGG AGATCGTCTG GGAAGGCGCC GACGTCGATC TGCACAAGCT GCCGATCCAG ACCTGCTGGC CCGGCGACGC GGGGCCGCTC GTCACGTGGG GCCTTACCGT CACGCGCGGG CCGAACAAAC CGCGCCAGAA CCTCGGCATC TACCGTCAGC AGCTGATCGG CCGCAACAAG CTGATCATGC GCTGGCTCGC GCATCGCGGC GGCGCGCTGG ACTTCCGCGA ATTCGCGCTG CAGAACCCGG GCAAGCCGTA TCCGGTCGCG GTCGTGCTGG GCGCGGATCC GGCCACGACG CTCGGCGCGG TGACGCCCGT GCCCGATTCG CTGTCCGAGT ACCAGTTCGC CGGCCTGCTG CGCGGCAGCC GCACCGAACT CGCGAAATGC CTGACGCCCG GCGTCGACAC GCTGCAGGTG CCCGCCCGCG CGGAGATCGT CCTCGAAGGC TTCATTCACC CGCAGGAAGG CACGCCCGCC GCTGCTCCAG CCGGCGCACC GCCGCGTCCG GCCGGCAACG CGTCCGCCGC GTACGAGCAC GCGCTCGAAG GCCCGTACGG CGACCACACC GGCTACTACA ACGAGCAGGA GTGGTTTCCG GTGTTCACCG TCGAGCGCAT CACGATGCGC CGCGACGCGA TCTATCACTC GACCTACACG GGCAAGCCGC CCGACGAGCC GGCCGTGCTC GGCGTCGCGC TCAACGAGGT GTTCGTGCCG CTGCTGCAGA AGCAGTTCAC GGAAATCACC GACTTCTACC TGCCGCCGGA AGGCTGCAGC TACCGGATGG CCATCGTCCA GATGAAGAAG AGCTACGCGG GCCATGCGAA GCGCGTGATG TTCGGCGTGT GGAGCTTCCT GCGGCAGTTC ATGTATACGA AGTTCATCGT GGTCGTCGAC GAGGACGTGA ACATCCGCGA CTGGAACGAG GTGATCTGGG CGATCACGAC GCGCGTCGAC CCCGTGCGCG ACACCGTGAT GGTCGACAGC ACGCCGATCG ACTATCTCGA TTTCGCGTCG CCCGTCGCGG GCCTCGGCTC GAAGATGGGG CTCGACGCGA CCAACAAGTG GCCCGGCGAG ACGAACCGCG AATGGGGCCG CCCGATCGAG ATGGACGCGG CCGTGAAGGC GCGCGTCGAT CGCCTCTGGC AAGAGATCGG ACTCTGA
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Protein sequence | MKYKDLRDFI QRLEALGELR RVTQPVSPVL EMTELCDRVL RAGGPALLFN APPGNAFPVL GNLFGTPRRV ALGMGVDAGD DAALGSLRDL GRLLSALKEP DPPKSLKDAG KLLSLAKAVW DMAPKSVSSP PCQEIVWEGA DVDLHKLPIQ TCWPGDAGPL VTWGLTVTRG PNKPRQNLGI YRQQLIGRNK LIMRWLAHRG GALDFREFAL QNPGKPYPVA VVLGADPATT LGAVTPVPDS LSEYQFAGLL RGSRTELAKC LTPGVDTLQV PARAEIVLEG FIHPQEGTPA AAPAGAPPRP AGNASAAYEH ALEGPYGDHT GYYNEQEWFP VFTVERITMR RDAIYHSTYT GKPPDEPAVL GVALNEVFVP LLQKQFTEIT DFYLPPEGCS YRMAIVQMKK SYAGHAKRVM FGVWSFLRQF MYTKFIVVVD EDVNIRDWNE VIWAITTRVD PVRDTVMVDS TPIDYLDFAS PVAGLGSKMG LDATNKWPGE TNREWGRPIE MDAAVKARVD RLWQEIGL
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