| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_0787 |
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| Symbol | |
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| ID | 4309503 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008390 |
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| Strand | - |
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| Start bp | 875752 |
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| End bp | 877059 |
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| Gene Length | 1308 bp |
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| Protein Length | 435 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 638148582 |
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| Product | branched chain amino acid ABC transporter periplasmic ligand-binding protein |
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| Protein accession | YP_772680 |
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| Protein GI | 115350841 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
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| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence
[TIGR03407] urea ABC transporter, urea binding protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.238628 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAACGTC GCAGTCTGCT GAAGTTCGGT TCGATGGCCG GTGCACTCGC GCTGGCGGGC
AAGAGTCCGT TCGCGCAAGC GGCCGATACG GGCACGGGCC CGATCAAGGT CGGCATCCTG
CATTCGCTGT CGGGCACGAT GGCGATCTCC GAAACGTCGC TGAAGGACAC GGCGCTGATG
ACGATCGCCG ACATCAACAA GAGCGGCGGC GTGATGGGCC GCAAGCTCGA GCCGGTGGTC
GTCGATCCCG CATCGAACTG GCCGCTGTTC GCGGAGAAGG CGCGCCAGCT GCTCACGCAG
GACAAGGTCG CGTGCGTGTT CGGCTGCTGG ACGTCGGTGT CGCGCAAGTC GGTGCTGCCG
GTGTTCGAGG AACTGAATGG CCTGCTCTAC TACCCGGTGC AGTACGAAGG CGAGGAAATG
TCGCGCAACG TGTTCTACAC GGGCGCCGCG CCGAACCAGC AGGCGATCCC GGCCGTCGAG
TACCTGATGG GCGCGGAAGG CGGCGGCGCG AAGCGCTTCT TCCTGCTCGG TACCGACTAC
GTGTATCCGC GCACGACCAA CAAGATCCTG CGTGCGTTCC TGAAATCGAA GGGCGTGAAG
GACGCCGACA TTCAGGAGGT CTACACGCCG TTCGGCCACA GCGATTACCA GACGATCGTC
GCGAACATCA AGACCTTCGC GCAAGGCGGC AAGACGACCG TGATCTCGAC GATCAACGGC
GATTCGAACG TGCCGTTCTA CAAGGAGCTC GGCAACCAGG GGATCAAGGC GACCGACGTG
CCGGTGGTCG CGTTCTCGGT CGGCGAGGAA GAACTGCGCG GGATCGACAC GAAGCCGCTC
GTCGGCCACC TCGCCGCGTG GAACTACTTC ATGTCGGTGA AGAACCCGAC GAACACGAAG
TTCAAGGATC AGTTCGCCGC GTGGGTGAAG GCGAACAACC TGCCGGGCGG TGCGAAGCGC
GTGACCAACG ACCCGATGGA GGCGACCTAT GTGGGCATCC ACATGTGGAA GCAGGCCGTC
GAGAAGGCGA AGAGCACGGA CGTCGACAAG GTGCGCGTCG CGATGATCGG CCAGAGCGTC
GTCGCGCCGT CGGGCTTCAC GCTGTCGATG GACGGCAACC ACCACCTGCA CAAGCCGGTG
ATGATCGGCG AGATTCGCGG CGACGGGCAA TTCAACGTCG TGTGGAAGAC GAAGACGGCC
GTGCGCGCGC AGCCGTGGAG CCCGTTCATC GCGGGCAACC AGGGCAAGCC GGACATCGTC
AGCTCGATCC CGGCATTCCT GCGGCGGCAG CGCGCGGCGC TCGTCTGA
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| Protein sequence | MKRRSLLKFG SMAGALALAG KSPFAQAADT GTGPIKVGIL HSLSGTMAIS ETSLKDTALM
TIADINKSGG VMGRKLEPVV VDPASNWPLF AEKARQLLTQ DKVACVFGCW TSVSRKSVLP
VFEELNGLLY YPVQYEGEEM SRNVFYTGAA PNQQAIPAVE YLMGAEGGGA KRFFLLGTDY
VYPRTTNKIL RAFLKSKGVK DADIQEVYTP FGHSDYQTIV ANIKTFAQGG KTTVISTING
DSNVPFYKEL GNQGIKATDV PVVAFSVGEE ELRGIDTKPL VGHLAAWNYF MSVKNPTNTK
FKDQFAAWVK ANNLPGGAKR VTNDPMEATY VGIHMWKQAV EKAKSTDVDK VRVAMIGQSV
VAPSGFTLSM DGNHHLHKPV MIGEIRGDGQ FNVVWKTKTA VRAQPWSPFI AGNQGKPDIV
SSIPAFLRRQ RAALV
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