| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_0786 |
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| Symbol | |
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| ID | 4309502 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008390 |
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| Strand | - |
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| Start bp | 873991 |
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| End bp | 875610 |
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| Gene Length | 1620 bp |
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| Protein Length | 539 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 638148581 |
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| Product | inner-membrane translocator |
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| Protein accession | YP_772679 |
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| Protein GI | 115350840 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0559] Branched-chain amino acid ABC-type transport system, permease components |
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| TIGRFAM ID | [TIGR03409] urea ABC transporter, permease protein UrtB |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCTACCC GCTTTCGCCG CGCCGCCGTC GCGGTCGTCG CCTGTGCCGC GCTGGCCTGC
GCGCTGCCGC GCGCCGCGTT CGCCCTGACG GCCGCCGATA CCGCCGCGCT CGCCGGCGAC
GACTTCGACG CGAAAACGAC CGCGATCGAA CGGATCGCCG CCGATGCCGA TCCGCGCGCC
GTCGCGCTGC TCAATGCGCT GTCGACCGGC GACGCGCTCG CGACCGGCGA CGGCCGCCTG
CTGATCCAGA CCGGCGACAC CGCGCACGAT GCGCTGACGC AGGCCGCGAC GCCGGCCGGC
GACGCGCAGC CCGTGATGCT GAACAACCTG CTGCGCACGA AGATCGCCGC CGCGCTGTCG
GGCCTCGCGC TCGCATCGCC CGACGTCGCC GCGCGCCGCG ACGCGATCGA CGCGCTGCTG
AAGTCGCCCG ACCCGGCACT CAAGCCGATG ATCGAGCGCG CACGCGCGAA GGAAACCGAC
CCGGCATTGA AGCGCCGCCT CGACGCACTG TGGGCCATCG CCGCGCTGCA CGATGCCGAT
CCGGCGAAGC GTCTCGACGC CGTGCAGGTG GTGGCCGCGC GCAGCGATCT CGACATGATC
GAGCAGTTGC GCCCGCTCGT CGCGAAGAAC GCCGACGGCA GCTACACGGA ACCCGACGCA
CGCGTACGCG CAGCCGCGCA GCAAGGGCTC GACACGTTGC ACGCGCTGCA GCGCCGCGGC
GAGATCGTGG GCACCGTGTT CGCGGGCCTG TCGCTCGGCA GCGTGCTGCT GCTCGCGGCG
CTCGGCCTCG CGATCACGTA CGGGCTGATC GGCGTGATCA ACATGGCGCA CGGCGAATTC
CTGATGATCG GTGCGTACGC AACCTATGTC GTGCAGACGC TGATCCAGCG CCATGCGCCG
ACCGCGTTCG ACTGGTATCC GCTCGTCGCG GTGCCCGTGT CGTTCGCGGC GGCCGCGCTG
GTCGGCATCG TGCTTGAACG GCTCGTGCTG CGGCACCTGT ACGGCCGCCC GCTCGAGACG
CTGCTCGCGA CGTTCGGCGT GAGCCTGATC CTGATCCAGG CGACGCGCAT GCTGTTCGGC
GCGCAGAACG TGCAGGTCGT GAACCCGTCG TGGATGAGCG GCGGCGTGAC CGTGATGCAG
AACCTGATCC TGCCGTACAA CCGGCTCGCG ATCCTCGCGT TCGCGCTCGC GGTCGTGTTC
GTCGCGTGGG CGGTACTGAC AAAGACGCGG CTCGGCCTGT TCGTGCGCGC GGTCACGCAG
AACCGCCGGA TGGCCGCGTG CGTCGGCGTG AAGACCGCGC GTGTCGATGC GTATGCGTTC
GCGTTCGGCG CGGGCATCGC GGGCCTCGGC GGCTGCGCGC TGTCGCAGAT CGGCAACGTG
GGCCCCGATC TCGGGCAGAA CTACATCATC GATTCGTTCA TGGCGGTGGT GCTCGGCGGC
GTCGGCCAGA TCGCCGGCAC CGTGCTCGGC GGCTTCGGGC TCGGTCTCGT CAGCAAGGCG
ATCGAACCGT TCTGGGGCGC CGTGCTCGCG AAGATCGCGG TGCTCGTGAT GATCGTGCTG
TTCATCCAGA AACGTCCGCA GGGCATGTTC GCCCCGAAGG GCCGCAGCGC GGAGGCGTGA
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| Protein sequence | MPTRFRRAAV AVVACAALAC ALPRAAFALT AADTAALAGD DFDAKTTAIE RIAADADPRA
VALLNALSTG DALATGDGRL LIQTGDTAHD ALTQAATPAG DAQPVMLNNL LRTKIAAALS
GLALASPDVA ARRDAIDALL KSPDPALKPM IERARAKETD PALKRRLDAL WAIAALHDAD
PAKRLDAVQV VAARSDLDMI EQLRPLVAKN ADGSYTEPDA RVRAAAQQGL DTLHALQRRG
EIVGTVFAGL SLGSVLLLAA LGLAITYGLI GVINMAHGEF LMIGAYATYV VQTLIQRHAP
TAFDWYPLVA VPVSFAAAAL VGIVLERLVL RHLYGRPLET LLATFGVSLI LIQATRMLFG
AQNVQVVNPS WMSGGVTVMQ NLILPYNRLA ILAFALAVVF VAWAVLTKTR LGLFVRAVTQ
NRRMAACVGV KTARVDAYAF AFGAGIAGLG GCALSQIGNV GPDLGQNYII DSFMAVVLGG
VGQIAGTVLG GFGLGLVSKA IEPFWGAVLA KIAVLVMIVL FIQKRPQGMF APKGRSAEA
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