| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_0785 |
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| Symbol | |
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| ID | 4309501 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008390 |
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| Strand | - |
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| Start bp | 872805 |
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| End bp | 873989 |
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| Gene Length | 1185 bp |
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| Protein Length | 394 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 638148580 |
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| Product | inner-membrane translocator |
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| Protein accession | YP_772678 |
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| Protein GI | 115350839 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG4177] ABC-type branched-chain amino acid transport system, permease component |
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| TIGRFAM ID | [TIGR03408] urea ABC transporter, permease protein UrtC |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACTTCAA TCACCGATTC GTTGTCGAAC CCGGTCGCCG ACGCGCCGAA GCCCGCCGCC
GTGCCCGCGA AGGAAGGCTT CGCGCTCGGC CTGCCGCCGC GCCCCGCGCT GCTGTCGCGC
CGCGCGTGGC TCGCGCTCGT CGCGCTGTGC ATCGCGATCG GCGTCGGCGT GCCGCTGGCC
GCGCTGGTCG CGCCCGAGTC GAGCGCGTTC CATCTGTCCG CGTACGCGAT GACGCTGGGC
GGCAAGCTGA TGTGCTACGC GATCGCCGCG CTCGCGCTCG ATCTCGTGTG GGGCTACTGC
GGCATCCTCA GTCTCGGCCA CGGGCTGTTC TTCGCGCTCG GCGGCTATGC GATCGGCATG
TACCTGATGC GCGAGATCGG CCACGAGGGC AAGTACGGCA GCGACCTGCC AGACTTCATG
GTGTTCCTCG ACTGGCATCA GCTGCCCTGG TACTGGAGCG GCACGCAGCA TCTCGCGTGG
GCGCTCGCGC TGGTCGTGCT CGTGCCGGCC GTGCTCGCGT GGGTGTTCGG CTTCTTCACG
TTCCGCTCGC GCGTGAAGGG CGTGTACCTG TCGATCATCA CGCAGGCGCT GACGTTCGCC
GCGATGCTGC TGTTCTTTCG CAACGAGACG GGCTTCGGCG GCAACAACGG CTTCACCGAC
TTCAAGCGCA TCGCCGGGTT TGCGATCACG TCGCCCGGCA CGCGCACGGT GCTGTTGCTG
CTGACCTTCG CGACGCTCGT GCTCGCGTTC ATCGTTGCGC GCGCGATCGT CACGAGCAAG
CTCGGGCGCG TGGTCACCGC GGTGCGCGAC GGCGAGACGC GGCTGATGTT CCTCGGCTAC
AGCCCGCTCG CGTACAAGCT GTTCGTGTGG ACGCTGTCGG CCGTGCTGTG CGGCATCGCG
GGCGCGCTGT ACGTGCCGCA GGTCGGCATC ATCAATCCCG GCGAGATGTC GCCCGGCAAC
TCGATCGAAA TGGCGATCTG GGTCGCGGTG GGCGGGCGCG GCACGCTGAT CGGGCCGATC
GTCGGCGCGT TCGCGGTGAA CGGCGCGAAG AGTTTCTTTA CCGCGTACTT CGCCGAATAC
TGGCTGTTCT TTCTCGGCCT GATCTTCGTG CTGGTGCCGC TGTTGCTGCC GCGCGGGATC
ATGGGCCTCG TCGACACGCT GCTTGCGAAG GGGAAACGCG GATGA
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| Protein sequence | MTSITDSLSN PVADAPKPAA VPAKEGFALG LPPRPALLSR RAWLALVALC IAIGVGVPLA
ALVAPESSAF HLSAYAMTLG GKLMCYAIAA LALDLVWGYC GILSLGHGLF FALGGYAIGM
YLMREIGHEG KYGSDLPDFM VFLDWHQLPW YWSGTQHLAW ALALVVLVPA VLAWVFGFFT
FRSRVKGVYL SIITQALTFA AMLLFFRNET GFGGNNGFTD FKRIAGFAIT SPGTRTVLLL
LTFATLVLAF IVARAIVTSK LGRVVTAVRD GETRLMFLGY SPLAYKLFVW TLSAVLCGIA
GALYVPQVGI INPGEMSPGN SIEMAIWVAV GGRGTLIGPI VGAFAVNGAK SFFTAYFAEY
WLFFLGLIFV LVPLLLPRGI MGLVDTLLAK GKRG
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