Gene Bamb_0753 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_0753 
Symbol 
ID4309312 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008390 
Strand+ 
Start bp835031 
End bp835582 
Gene Length552 bp 
Protein Length183 aa 
Translation table11 
GC content60% 
IMG OID638148548 
ProductdTDP-4-dehydrorhamnose 3,5-epimerase 
Protein accessionYP_772646 
Protein GI115350807 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1898] dTDP-4-dehydrorhamnose 3,5-epimerase and related enzymes 
TIGRFAM ID[TIGR01221] dTDP-4-dehydrorhamnose 3,5-epimerase 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAATTC AAATAACGGC AACCTCGCTG CCGGAAGTCA AAATCGTCGA GCCGAAGGTG 
TTCGGCGACG CGCGCGGCTA TTTTTATGAA AGCTTCAATG CGCGCGAGTT CGCGGAGCAC 
GTGGCGGCTG ACGTTGAATT CGTTCAGGAC AATCATTCGC GCTCCGCGAA GGGAGTGCTG 
CGCGGTTTGC ACTACCAGAT TCGGCATGCA CAGGGAAAGC TCGTGCGCGT CGTGGAGGGC 
GAGGTATTCG ACGTTGCGGT CGACATCCGC AGGAGCTCAC CGGATTTCGG CAAGTGGGTT 
GGCGTCGTCC TGTCGGCCGA GAATCATCGG CAAGTCTGGA TTCCACCTGG TTTCGCGCAT 
GGTTTCGTCG TACTGTCCGA CGCTGCGCAG TTCCTGTATA AGACGACCGA CTACTGGTAT 
CCCGAGCACG AGCGCTGTAT CGTGTGGAAC GATCCGGCAA TCGGAATCGA ATGGCCGGTC 
GATGTGGACC CGTTGCTGGC GGCCAAGGAC GCCGCGGGGG CGCGACTCAG CGAAGCCGAG 
GTCTACGCTT GA
 
Protein sequence
MAIQITATSL PEVKIVEPKV FGDARGYFYE SFNAREFAEH VAADVEFVQD NHSRSAKGVL 
RGLHYQIRHA QGKLVRVVEG EVFDVAVDIR RSSPDFGKWV GVVLSAENHR QVWIPPGFAH 
GFVVLSDAAQ FLYKTTDYWY PEHERCIVWN DPAIGIEWPV DVDPLLAAKD AAGARLSEAE 
VYA