| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_0725 |
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| Symbol | |
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| ID | 4311081 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008390 |
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| Strand | + |
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| Start bp | 807267 |
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| End bp | 808511 |
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| Gene Length | 1245 bp |
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| Protein Length | 414 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 638148520 |
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| Product | D-amino-acid dehydrogenase |
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| Protein accession | YP_772618 |
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| Protein GI | 115350779 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0665] Glycine/D-amino acid oxidases (deaminating) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0605876 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATTTCG ACGTCATCGT TCTGGGGGCC GGCATCGTCG GCGTGTCGTC GGCGCTGCAT
CTGCAGGATC GCGGGCTGCG GGTCGCGCTC GTCGACCGGC GCGCGCCCGG CGAGGAAACG
AGCCACGGCA ATGCCGGGCT GATCGAGCGC TCGTCGGTCG TGCCGTACGC GTTCCCGCGC
CGGCTCGGCA CGCTGCTGCG CTACGCACGC AACCGCTCGG TCGATCTCTA TTGGGACTAC
AAGGCGCTGC CTGCGTACGC GGGCTGGCTC GCGCGCTTCT GGCGCGAATC GTCGCCGCAG
CGGCTCGCGG CTGCCGCGCG CGACATGCTG CCGCTTGTCG CGGCGAGCGT CGTCGAGCAC
GACGCGCTGC TCGCGCGCAC CGACGCACAG CCGCTCGTGC ATGACGGCGG GTGGCTCGAG
GCGTTCCGGT CGCCCGCGCT GTTCGATGCG GAAACGCGCG CGCAGCAGCG GGTGGCCGAC
GCGCACGGGT TGCGGATGAG CGTGCTCGAC GCGCGCGCGC TGCGCGAGCG CGAGCCCGGC
ATCGGCGACG CGTTCTGCGG CGCGTTCCAC TGGCAGGATC CGAAGACGGT ATCGAGCCCC
GGCGGCCTCA CGAAGGCGTA CGCGCGGCTG TTCGAGCGCG ACGGCGGCAC ATTCGTGCAC
GGCGACGCGA CGACGCTCGC GCAGGTGCGC GACGGCTGGC AGGTCGATAC CGACCATGGG
CTGATCTCGG CCCGGTTGGC CGTGGTCGCG CTCGGGCCGT GGTCCGATCA CGTGTTCGCG
CCGCTCGGCT ACCGGATTCC GCTGCGCGCG AAGCGCGGCT ATCACATGCA TTACTTGCCG
ACCCGCGCGC CGCTGAACGT GCCGGTGTGC GATACCGAGG CGGGTTTCGT CGTCGCGCCG
ATGGAGGGCG GCCGCCTGCG GCTCACGACC GGCGTCGAGA TCGCGTTGCG CGACGCGCCG
CCGACCGGCG TGCAGCTCGC GCGTGCCGAG CCGCTCGCGC GCGACGCGTT CGGCATCGGC
GAGCGGCTCG ATTCGGCGCC GTGGCTCGGG ATGCGGCCGT GCACGCCCGA CATGCGACCG
GTGATCGGAC CGGCGCCGCG CCATCGTCAT CTGTGGTTCG CGTTCGGCCA TTGCCACCAC
GGCCTCACGC TCGGCCCCGC GAGCGGACGG CTGCTCGCCG AAATGATCAC CGGCGCGCCG
ACCTACATCG ATCCCCATCC GTACCGGCCC GCGCGTTTCG GCTGA
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| Protein sequence | MDFDVIVLGA GIVGVSSALH LQDRGLRVAL VDRRAPGEET SHGNAGLIER SSVVPYAFPR
RLGTLLRYAR NRSVDLYWDY KALPAYAGWL ARFWRESSPQ RLAAAARDML PLVAASVVEH
DALLARTDAQ PLVHDGGWLE AFRSPALFDA ETRAQQRVAD AHGLRMSVLD ARALREREPG
IGDAFCGAFH WQDPKTVSSP GGLTKAYARL FERDGGTFVH GDATTLAQVR DGWQVDTDHG
LISARLAVVA LGPWSDHVFA PLGYRIPLRA KRGYHMHYLP TRAPLNVPVC DTEAGFVVAP
MEGGRLRLTT GVEIALRDAP PTGVQLARAE PLARDAFGIG ERLDSAPWLG MRPCTPDMRP
VIGPAPRHRH LWFAFGHCHH GLTLGPASGR LLAEMITGAP TYIDPHPYRP ARFG
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