Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bamb_0710 |
Symbol | |
ID | 4308998 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria AMMD |
Kingdom | Bacteria |
Replicon accession | NC_008390 |
Strand | - |
Start bp | 788926 |
End bp | 790140 |
Gene Length | 1215 bp |
Protein Length | 404 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 638148505 |
Product | major facilitator superfamily transporter |
Protein accession | YP_772603 |
Protein GI | 115350764 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCAACCG ATTCCGCCAC ACCGCCGCGC AGCGGGTTCG CGGTCACGCT GCAAATCGTG TCCGTCGTCA GCTTCACGTT CATCTGCTAC CTGACCATCG GCCTGCCGCT CGCCGTGCTG CCGGGCTTCG TCCACGACGA TCTCGGCTTT TCCGCGATCG TCGCGGGCGG TGCGATCAGC GTCCAGTATT TCGCGACGCT CGCCTCGCGC CCGCTCGCGG GGCGCTTCGC CGATACGCTC GGGCCGAAGC AGACGGTGCT GCGTGGGCTG ATCGGCTGCG GCGTGTCGGG CGTGCTGCTG CTCGTCGCGC TGCTGCTGGC CCACTGGCCA GTCGCGAGCC TCGTGCTGCT GGTCGCGAGC CGGCTCGTGC TGGGTGTCGG CGAAAGCCTG TGCGGCACGG GGGCGATCCT GTGGGGCATT GGCCGGGTCG GCGTCGCGCA CAACGCGAAG GTGATCTCGT GGAACGGCAT CGCGACCTAC GGCGCACTCG CGCTCGGCGC ACCGGTCGGC GTGGCGATCG CGCATACGCT GAACCCGGCG CTGATCGGCG TGATCGTGAT CGCGCTCGCC GCGATCGGCT TCTACCTCGC ACGCCTGATC GATGCCGTGC CGCTCGTGCA TGGCGAGCGG ATGTCGTATG CGAGCGTGTT CACCCGCGTG CTGCCGCACG GCCTCGGCCT CGCGCTCGGC TCGGCCGGTT TCGGCTCGAT CGCGACCTTC GTCACGCTGT ACTACGCGGC GCGCCACTGG CCGAACGCCG CACTGTCGCT GACCGTGTTC GGCACGCTGT TCATCGGCGC GCGCCTGCTG TTCGCGAACA CGATCAAGAC CTACGGCGGC TTCCGCGTCG CGATCGTGTC GTTCGCGTTC GAATGCTCGG GCCTCCTGCT GCTGTGGCTC GCGCCCGTGC CGCACGTCGC GCTCGCCGGC GCCGCGCTGA CCGGCTTCGG CTTCGCGCTG ATCTTCCCGG CGCTCGGCGT CGAGGCCGTC GCGCTCGTGC CGCCCGCGAG CCGCGGCGCG GCGCTGTCCG CGTACTCGGT GTTCCTTGAC TTGTCGCTCG GCATTACCGG GCCGCTCGCC GGCTATATCG CGGGCGCGTT CGGCTATCCG CAGGTGTTCC TGTTCGCGGC CGTGGCCGCG GCGGCGGGTG TCGCGCTGTC GATGGTGCTG TATCAGCGGC AGGCGCGGGT CGCGGGGAGC GGCGCGGCGG CGTGA
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Protein sequence | MSTDSATPPR SGFAVTLQIV SVVSFTFICY LTIGLPLAVL PGFVHDDLGF SAIVAGGAIS VQYFATLASR PLAGRFADTL GPKQTVLRGL IGCGVSGVLL LVALLLAHWP VASLVLLVAS RLVLGVGESL CGTGAILWGI GRVGVAHNAK VISWNGIATY GALALGAPVG VAIAHTLNPA LIGVIVIALA AIGFYLARLI DAVPLVHGER MSYASVFTRV LPHGLGLALG SAGFGSIATF VTLYYAARHW PNAALSLTVF GTLFIGARLL FANTIKTYGG FRVAIVSFAF ECSGLLLLWL APVPHVALAG AALTGFGFAL IFPALGVEAV ALVPPASRGA ALSAYSVFLD LSLGITGPLA GYIAGAFGYP QVFLFAAVAA AAGVALSMVL YQRQARVAGS GAAA
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