| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_0705 |
|---|
| Symbol | |
|---|
| ID | 4308993 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria AMMD |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008390 |
|---|
| Strand | - |
|---|
| Start bp | 782586 |
|---|
| End bp | 783584 |
|---|
| Gene Length | 999 bp |
|---|
| Protein Length | 332 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 638148500 |
|---|
| Product | D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding |
|---|
| Protein accession | YP_772598 |
|---|
| Protein GI | 115350759 |
|---|
| COG category | [C] Energy production and conversion
[H] Coenzyme transport and metabolism
[R] General function prediction only |
|---|
| COG ID | [COG1052] Lactate dehydrogenase and related dehydrogenases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGCGCGTGA TCCTGTTCAG CAGCCGGCAG TACGACGACG AATCGTTTAC CGCCGCCAAC
CGGCAGTTCG GCTATCGGCT GCACTTCCAG CCATCCCATC TCGACGCGGA AACCGCGATC
CTCGCGCACG GCTATGAAGT CGTGTGTCCG TTCGTCAACG ACACCGTCGA CGCGGCCGTG
CTCGAACGGC TCGCCGACGG CGGCACGCGC CTGATCGCGC TGCGCTCGGC CGGCTTCAAC
CACGTCGACC TGGCCACCGC CGAGCGGCTT GGCATCGCGG TCGTACGGGT GCCCGCCTAT
TCGCCGCATG CGGTGGCCGA ACACGCGGTC GCGCTGATCC TCGCGCTCAA CCGCCGGCTG
CCGCGCGCGG TCGCGCGCAC GCGCGAAGGC GACTTCTCGC TGAACGGCCT GCTCGGCTTC
GACCTGCACG GCAAGACCGT CGGCGTGATC GGCACCGGCC TGATCGGCAG CGTGTTCGCG
AAGATCATGA TGGGTTTCGG AATGCACGTG CTCGCGCACT CGATGCCGCC GTACGACGAC
GAGCTGATCG CGTTCGGCGC GCGCTACGTC GAGCTCGACG AGCTGCTGCA CCACGCCGAC
ATCGTCAGCC TGCACTGCCC GCTGCTGCCG TCGACGCACC ATCTGATCAA CGCGCAGACG
CTCGCGCGGA TGAAGCACGG CGCGATGCTG ATCAATACCG GCCGCGGCGG CCTCGTCGAC
GCGCAGGCGT TGGTCGACGC GCTCAAGAGC GGCCAGCTCG GCCATCTCGG GCTCGACGTG
TACGAGGAGG AAAGCGGGCT CTTCTTCGAG GATCACTCCG ACCTGCCGCT GCAGGACGAC
GTGCTCGCGC GCCTGCTGAC GTTCCCGAAC GTAATCGTCA CGTCGCACCA GGCGTTCTTC
ACGCGCGAGG CGCTCGCCGA GATCGCGCAC ACGACGCTGC TGAACATCGA GGCATGGCAC
GCCGGCACGC CGACCAACGT CGTCACGGCC GGGCGCTGA
|
|---|
| Protein sequence | MRVILFSSRQ YDDESFTAAN RQFGYRLHFQ PSHLDAETAI LAHGYEVVCP FVNDTVDAAV
LERLADGGTR LIALRSAGFN HVDLATAERL GIAVVRVPAY SPHAVAEHAV ALILALNRRL
PRAVARTREG DFSLNGLLGF DLHGKTVGVI GTGLIGSVFA KIMMGFGMHV LAHSMPPYDD
ELIAFGARYV ELDELLHHAD IVSLHCPLLP STHHLINAQT LARMKHGAML INTGRGGLVD
AQALVDALKS GQLGHLGLDV YEEESGLFFE DHSDLPLQDD VLARLLTFPN VIVTSHQAFF
TREALAEIAH TTLLNIEAWH AGTPTNVVTA GR
|
|---|
| |