| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_0701 |
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| Symbol | |
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| ID | 4309714 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008390 |
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| Strand | + |
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| Start bp | 777557 |
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| End bp | 778891 |
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| Gene Length | 1335 bp |
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| Protein Length | 444 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 638148496 |
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| Product | homogentisate 1,2-dioxygenase |
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| Protein accession | YP_772594 |
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| Protein GI | 115350755 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG3508] Homogentisate 1,2-dioxygenase |
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| TIGRFAM ID | [TIGR01015] homogentisate 1,2-dioxygenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACGCTTG ACCTGTCGAA ACCGGCAACC GCCGGCTACC TGAGCGGATT CGCGAACGAA
TTCGCGACCG AGGCGCTGCC CGGCGCGCTG CCGCACGGCC GCAATTCGCC GCAGCGCGCG
CCGTACGGCT TGTATGCGGA GCAACTGTCG GGCACCGCGT TTACCGCGCC GCGCGGCCAC
AACCGCCGCT CGTGGCTGTA CCGGATCCGG CCGGCGGCCG TGCACCGGCC GTTCGAGCCG
TTCACGGGCC CGCAGCGGCT CGTGTCGGAA TTCGGCGACT CCGCCGACGT GCCGCCGACG
CCGCCGAACC AGCTGCGCTG GGATCCGCTG CCGATGCCGG TCGAGCCGAC CGATTTCGTC
GAAGGGCTCG TGACGATGGC CGGCAACGGC TCGGCGGCCG CGATGAACGG CTGCGCGATC
CACCTGTATG CGGCGAACCG CTCGATGCAG GACCGTTTCT TCTACAGCGC CGACGGCGAA
CTGCTGATCG TGCCGCAGCA GGGGCGGCTC TTCATCGCGA CCGAATTCGG CCGGCTCGAC
GTCGAGCCGT TCGAGATCGC GGTGATCCCG CGCGGCGTGC GTTTTTCCGT CGCGCTGCCG
GACGGCGACG CGCGCGGCTA CATCTGCGAG AACTTCGGCG CGCTGCTGCG CCTGCCGGAC
CTCGGCCCGA TCGGCTCGAA CGGGCTCGCG AACCCGCGCG ATTTCCTGAC GCCGCAGGCC
GCATACGAGG ATCGCGAAGG CGCGTTCGAG CTGGTCGCGA AGCTGAACGG ACGCCTCTGG
CGCGCGGACA TCGGCCATTC GCCGTTCGAC GTCGTCGCGT GGCACGGCAA CTACGCGCCG
TACAAATACG ACCTGCGCCT GTTCAACACG ATCGGCTCGA TCAGCTTCGA CCATCCGGAC
CCGTCGATCT TCCTGGTGCT GCAGTCGCAG AGCGACACGC CGGGCGTCGA CGCGATCGAC
TTCGTGATCT TCCCGCCGCG CTGGCTCGCG GCCGAGGATA CGTTCCGCCC GCCGTGGTTC
CATCGCAATG TCGCGAGCGA GTTCATGGGG CTCGTGCACG GCGCGTACGA CGCGAAGGCC
GAGGGCTTCG TGCCGGGCGG CGCGAGCCTG CACAACTGCA TGTCGGGTCA CGGGCCCGAC
GCGGACACGT TCGAGAAGGC GTCGGCGAGC GACACGACGA AGCCGCACAA GGTCGACGCG
ACGATGGCGT TCATGTTCGA AACCCGCACG CTGATCCGTC CGACGCGCTA CGCGCTCGAC
ACCGCGCAGC TGCAGCCCGA CTACTTCGAA TGCTGGCAAG GCATCAGGAA ACATTTCAAT
CCGGAGCAAC CATGA
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| Protein sequence | MTLDLSKPAT AGYLSGFANE FATEALPGAL PHGRNSPQRA PYGLYAEQLS GTAFTAPRGH
NRRSWLYRIR PAAVHRPFEP FTGPQRLVSE FGDSADVPPT PPNQLRWDPL PMPVEPTDFV
EGLVTMAGNG SAAAMNGCAI HLYAANRSMQ DRFFYSADGE LLIVPQQGRL FIATEFGRLD
VEPFEIAVIP RGVRFSVALP DGDARGYICE NFGALLRLPD LGPIGSNGLA NPRDFLTPQA
AYEDREGAFE LVAKLNGRLW RADIGHSPFD VVAWHGNYAP YKYDLRLFNT IGSISFDHPD
PSIFLVLQSQ SDTPGVDAID FVIFPPRWLA AEDTFRPPWF HRNVASEFMG LVHGAYDAKA
EGFVPGGASL HNCMSGHGPD ADTFEKASAS DTTKPHKVDA TMAFMFETRT LIRPTRYALD
TAQLQPDYFE CWQGIRKHFN PEQP
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