Gene Bamb_0700 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_0700 
Symbol 
ID4309713 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008390 
Strand
Start bp776180 
End bp777541 
Gene Length1362 bp 
Protein Length453 aa 
Translation table11 
GC content71% 
IMG OID638148495 
Productmajor facilitator transporter 
Protein accessionYP_772593 
Protein GI115350754 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID[TIGR00895] benzoate transport 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCGCGG CGCCGGCCGA CGCGCGCGTG CTCGAAGTCG AGCGCGTGAT CGACGAGACC 
CATCGCCCGG GCTTTCACTG GATGCTGCTC GCGCTGTGCG GGCTGTGCCT CGTGATCGAC
GGCTTCGATG CGCAGGCGAT GGGGTATGTC GCGCCCAGCG TGATCGCCGA ATGGGGCGTG
CCGAAGCAGG CGCTCGGTCC GGTGTTCAGC GCGAGCCTGT TCGGGATGCT GCTCGGCGCG
CTCGGGCTGT CGGTGCTCGC CGACCGGATC GGGCGGCGCC CGGTGCTGAT CGGCTCGACG
CTGTTCTTCG CGGTGACGAT GCTCGCGACG CCGTTCGCGG GCTCGATCCC GGTGCTGATG
GCGCTGCGCT TCGTCACGGG CCTCGGCCTC GGCTGCATCA TGCCGAACGC GATGGCGCTG
GTCGGCGAGT TCAGCCCGGC CGCGCATCGC GTGAAGCGGA TGATGATCGT GTCGTGCGGC
TTCACGCTCG GCGCCGCGAT CGGCGGCTTC ATCAGCGCCG CGCTGATTCC GGCGCTCGGC
TGGCGCTCGG TGTTCTTCGT CGGCGGCGCG GTGCCGCTGG TGCTGACGAC CGCGATGCTC
GCGCGGCTGC CCGAGTCGCT GCAGTTCCTG GTGCTGAAAG GGCGCGACGC GCAGGCGCGC
GACTGGCTCG CGCGCTTCGC GCCGCAGGCC GGCATCGACG CGAACACGCG TCTGGTCGTG
CGCGAGCGTG CGGCGAGCGG CGCGCCGGTT GCCGAGCTGT TCCGTCATGG CCGCCTGCCG
GTCACGCTGC TGCTGTGGGC CATCAGCTTC ATGAACCTGA TCGACCTGTA CTTCCTGTCG
AACTGGCTGC CGACCGTCAT GCGCGACGCG GGCTATTCGC CGGGCACGGC GGTGATCGTC
GGCACGGTGC TGCAGACGGG CGGCGTGATC GGCACGCTGT CGCTCGGCTG GTTCATCGAA
CGCCACGGCT TCGTGCGCGT GCTGTTTGCG TGCTTCGCGT GCGCGGCGGT GTCGGTCGGC
CTGATCGGCT CGGTCGCGCA TGCGTTGCCG TGGCTGCTGA TCGTCGTGTT CGCGGGCGGC
TTCTGCGTGG TCGGCGGGCA GCCGGCCGTC AACGCGCTCG CGGGCCAGTA TTACCCGACG
TCGCTGCGCT CGACCGGCAT CGGCTGGAGC CTCGGCATCG GCCGGATCGG CTCGGTGCTC
GGGCCGCTCG TCGGCGGACA ACTGATTGCG CTCAACTGGA CGCACGGCGC GCTGTTCCAC
GCGGCCGCGG TGCCCGTGCT GTGCTCGGCG CTGTTCGTGC TCGGGCTGGC CGGCGTAACG
CGGCGCGGCG GTGCGCAGGC GCCGAACGCG GCCATGAATT GA
 
Protein sequence
MSAAPADARV LEVERVIDET HRPGFHWMLL ALCGLCLVID GFDAQAMGYV APSVIAEWGV 
PKQALGPVFS ASLFGMLLGA LGLSVLADRI GRRPVLIGST LFFAVTMLAT PFAGSIPVLM
ALRFVTGLGL GCIMPNAMAL VGEFSPAAHR VKRMMIVSCG FTLGAAIGGF ISAALIPALG
WRSVFFVGGA VPLVLTTAML ARLPESLQFL VLKGRDAQAR DWLARFAPQA GIDANTRLVV
RERAASGAPV AELFRHGRLP VTLLLWAISF MNLIDLYFLS NWLPTVMRDA GYSPGTAVIV
GTVLQTGGVI GTLSLGWFIE RHGFVRVLFA CFACAAVSVG LIGSVAHALP WLLIVVFAGG
FCVVGGQPAV NALAGQYYPT SLRSTGIGWS LGIGRIGSVL GPLVGGQLIA LNWTHGALFH
AAAVPVLCSA LFVLGLAGVT RRGGAQAPNA AMN