| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_0687 |
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| Symbol | |
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| ID | 4309700 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008390 |
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| Strand | + |
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| Start bp | 765709 |
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| End bp | 766548 |
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| Gene Length | 840 bp |
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| Protein Length | 279 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 638148482 |
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| Product | prepilin-type cleavage/methylation-like protein |
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| Protein accession | YP_772580 |
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| Protein GI | 115350741 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4966] Tfp pilus assembly protein PilW |
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| TIGRFAM ID | [TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCGTTGA ACGCTGATCG CCGCAGCCGC GCGCATACGC TGCTCGAAGT ACTGATCGCG
ATGATCGTCG GTCTGCTCGT GCTTGCCGCG GCCGGTGCGC TGTATCACGC GCAGCGCGTC
GCGCAGCGGC GGGCGGAAGA CGGATTCCGG ATGCGCGATG CGGCCGCGAT CGCACTGATG
CTGATCGGCC AGCAGATCCA GATGGCCGGG TTTCGGCCGC TCGATGTCGA AGGCGCGTCG
TCGTTGCCGC CGGTGTTCGG CTGTTCAGCG GGCCGCGTGC GAGGCGATGG CGCGCAGGTG
CGCTGCGAAC CCGTGCGCGC GGCGTCGGAT GCGGTACTGG TCCGGTATGT CGGCGATCCC
GTATCGACGT GGCCGACCAG CAGCGCACAG GTGTCGGATT GTCTCGGGCA GGGTGTCGGC
GCCCCGGGTG AGCGGCCACT CGTGGAAAAC CGTTTCGACG CGCATGTCAG CCCGTCGACG
GGCGAGCCCG AACTGTACTG CGAGGGAAGC GGGCGTCCGG GCACGCCGCA ACCGGTCGTG
TCCGGAATCG ACCAGCTGCG CGTGCGTTAC CTGCGTCGCG ACGGCGCCCA GTTCGTCGAT
GCACAGGCGA TGGGTGCCGA TGACTGGCGC GATGTCGTCG CCGTGCATGT GTGCGTGCGG
GCGCGTGGCG AACCGATGCC CGAGGCCGCG CGTCATGTCG ATTGCGACGG CCGCACGACC
ATTGCGCCGG AGGGTCGGGC GCATCTGGTG CTGCATCGAA TCGTCGCGAT GCGGAATTCC
GCGATCGCAT TCGCCGATCC TGTTCGTGAC GCGGCAACGG CCCACGAGGC GTTGCGATGA
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| Protein sequence | MPLNADRRSR AHTLLEVLIA MIVGLLVLAA AGALYHAQRV AQRRAEDGFR MRDAAAIALM
LIGQQIQMAG FRPLDVEGAS SLPPVFGCSA GRVRGDGAQV RCEPVRAASD AVLVRYVGDP
VSTWPTSSAQ VSDCLGQGVG APGERPLVEN RFDAHVSPST GEPELYCEGS GRPGTPQPVV
SGIDQLRVRY LRRDGAQFVD AQAMGADDWR DVVAVHVCVR ARGEPMPEAA RHVDCDGRTT
IAPEGRAHLV LHRIVAMRNS AIAFADPVRD AATAHEALR
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