Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bamb_0662 |
Symbol | |
ID | 4311315 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria AMMD |
Kingdom | Bacteria |
Replicon accession | NC_008390 |
Strand | - |
Start bp | 744317 |
End bp | 745129 |
Gene Length | 813 bp |
Protein Length | 270 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 638148456 |
Product | MscS mechanosensitive ion channel |
Protein accession | YP_772555 |
Protein GI | 115350716 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0668] Small-conductance mechanosensitive channel |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCGAACC TGGAAACCGC CCAGCAATTC CTGATGACCC GCGGCCTCGA CCTCGGCCTG AACCTCCTCG CCGCAGTCGT CTTATGGTTC ATCGGCCGTT GGGCGATCCG CCTCGGCACC CGCCTGCTCG GCAAGGTCGT GCGCCGCAGC GGCAAGGTCG ACCCGACGCT CACCGACTAC CTGACCTCGG TGGTCGGCGT GCTGCTGACG ATCCTGCTGA TCCTCGCGAT CCTGCAGATC TTCGGCGTTC AGACCACGTC GTTCGCCGCA CTGCTCGCCG GCCTCGGCCT CGCGATCGGC ACCGCCTGGG GCGGCCTGCT CGCCCACTTC GCCGCCGGCG TGTTCATGCA GGTGCTGCGT CCGTTCAAGA TCGGCGACGT GATCAGCGCG GGCGGCGTCA CGGGCACGGT GAAGGAGCTC GGCCTGTTCG GCACGACGAT CATCACCGCC GACAACATCG TGACGATCGT CGGCAACAAC AAGATCTTCT CGGACAACAT CGCGAATTAC AGCGCATCGC CGCATCGCCG CGTCGACCTG ACCGCGAAGA TCGCCAACAG CGTCGATGCC GTCGACGCGA TCAACCGCCT GAAGACGCAG ATCCAGGTGA TCCCGAACGT GCTGAAGGTG CCGGCGCCGG ACGTCGGCGT GCTGCAGTTC ACGCCGGAAG GCCCGCTGCT GTTCGTGCGC CCGTCGACGC AGCCGGAGAA CTACTGGCAG GTGTACTGCG ATACCAACCG CGTGATCCTC GAGACGTTCC GCGACGCGCA ATACCCGACG CCCGAAACGC CGCTCGCGCA TCGCACCACC TGA
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Protein sequence | MPNLETAQQF LMTRGLDLGL NLLAAVVLWF IGRWAIRLGT RLLGKVVRRS GKVDPTLTDY LTSVVGVLLT ILLILAILQI FGVQTTSFAA LLAGLGLAIG TAWGGLLAHF AAGVFMQVLR PFKIGDVISA GGVTGTVKEL GLFGTTIITA DNIVTIVGNN KIFSDNIANY SASPHRRVDL TAKIANSVDA VDAINRLKTQ IQVIPNVLKV PAPDVGVLQF TPEGPLLFVR PSTQPENYWQ VYCDTNRVIL ETFRDAQYPT PETPLAHRTT
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