Gene Bamb_0646 details

Gene Information

• Locus tag: Bamb_0646
• Symbol: dnaK
• ID: 4309293
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Burkholderia ambifaria AMMD
• Kingdom: Bacteria
• Replicon accession: NC_008390
• Strand: +
• Start bp: 726164
• End bp: 728116
• Gene Length: 1953 bp
• Protein Length: 650 aa
• Translation table: 11
• GC content: 64%
• IMG OID: 638148440
• Product: molecular chaperone DnaK
• Protein accession: YP_772539
• Protein GI: 115350700
• COG category: [O] Posttranslational modification, protein turnover, chaperones
• COG ID: [COG0443] Molecular chaperone
• TIGRFAM ID: [TIGR02350] chaperone protein DnaK

Plasmid Coverage information

• Num covering plasmid clones: 12
• Plasmid unclonability p-value: 0.568758
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGGAAAGA TCATCGGTAT TGACCTCGGC ACCACGAACT CGTGCGTCGC CATCATGGAA 
GGCAACCAGG TCAAGGTCAT CGAGAACTCG GAAGGCACGC GCACGACGCC GTCGATCATC 
GCCTACATGG ACGATAACGA AGTGCTCGTC GGCGCGCCGG CCAAGCGTCA GTCCGTGACC 
AACCCGCGGA ACACGCTGTT CGCCGTGAAG CGCCTGATCG GCCGCCGCTT CGAGGAGAAG 
GAAGTCCAGA AGGACATCGG CCTGATGCCG TACGCGATCA TCAAGGCCGA CAACGGCGAC 
GCATGGGTCG AAGCGCACGG CGAGAAGCTC GCGCCGCCGC AGGTTTCGGC GGAAGTGCTG 
CGCAAGATGA AGAAGACGGC CGAAGACTAC CTCGGCGAGC CGGTCACGGA AGCCGTGATC 
ACGGTGCCGG CGTACTTCAA CGACAGCCAG CGCCAGGCGA CCAAGGACGC CGGCCGCATC 
GCGGGCCTCG AAGTCAAGCG GATCATCAAC GAGCCGACCG CGGCCGCGCT CGCATTCGGC 
CTCGACAAGG CCGAGAAGGG CGACCGCAAG ATCGCCGTGT ATGACCTTGG CGGCGGCACG 
TTCGACGTGT CGATCATCGA GATCGCGGAC GTCGACGGCG AAATGCAGTT CGAAGTGCTG 
TCGACCAACG GCGACACGTT CCTCGGCGGC GAGGACTTCG ACCAGCGCAT CATCGATTAC 
ATCATCGGCG AGTTCAAGAA GGAGCAGGGC GTCGACCTGT CGAAGGACGT GCTCGCACTG 
CAGCGCCTGA AGGAAGCGGC CGAAAAGGCG AAGATCGAGC TGTCGTCGAG CCAGCAGACC 
GAAATCAACC TGCCGTACAT CACGGCCGAC GCATCGGGTC CGAAGCACTT GAACCTGAAG 
ATCACCCGCG CGAAGCTGGA AGCGCTGGTC GAGGACCTCG TCGAGCGCAC GATCGAACCG 
TGCCGCATCG CGATCAAGGA CGCCGGCGTC AAGGTGTCGG ACATCGACGA CGTGATCCTG 
GTCGGCGGCC AGACCCGCAT GCCGAAGGTG CAGGAGAAGG TGAAGGAGTT CTTCGGCAAG 
GATCCGCGCC GTGACGTGAA CCCGGACGAA GCCGTCGCGG TGGGCGCGGC GATCCAGGGC 
CAGGTGCTGT CGGGCGACCG CAAGGACGTG CTGCTGCTCG ACGTGACCCC GCTGTCGCTC 
GGTATCGAGA CGCTCGGCGG CGTGATGACG AAGATGATCA GCAAGAACAC GACGATCCCG 
ACGAAGCACG CACAGGTGTA TTCGACGGCG GACGACAACC AGTCGGCCGT GACGATCAAG 
GTGTTCCAGG GCGAACGCGA GATGGCGGCA GGCAACAAGC TGCTCGGCGA GTTCAACCTC 
GAAGGCATCC CGCCGTCGCC GCGCGGCGTG CCGCAGATCG AAGTGACCTT CGACATCGAC 
GCGAACGGCA TCCTGCACGT CGGCGCGAAG GACAAGGCGA CCGGCAAGGA AAACAAGATC 
ACGATCAAGG CGAACTCGGG CCTGACCGAC GCCGAAATCG ATCAAATGAT CAAGGACGCG 
GAAGCGAACG CAGCGGAAGA CCACAAGCTG CGCGAGCTGG CTGATTCGCG CAACCAGGGC 
GACGCGCTGG TCCACAGCAC GAAGAAGGCG CTCACCGAGT ACGGCGACAA GCTGGACGCG 
GGCGAGAAGG AAAAGATCGA AGCGGCGCTG AAGTCGCTCG AGGACGCGCT GAAGGATACG 
TCGGCCGACA AGGCGGCGAT CGACGCGAAG GTCGAGGAAC TCGGTCAGGT TTCGCAGAAG 
CTCGGTGAAA AGATGTACGC CGACATGCAG GCGCAGCAGG CCGGTGCGGC CGGCGCGGCG 
GGTGCAGCGG AAGGCGCGGC CCACGCGGGT GGTGCGCAGC AGGCCGCCGA CGACGTCGTC 
GACGCCGAGT TCAAGGAAGT GAAGAAGGAC TAA 

 

Protein sequence

MGKIIGIDLG TTNSCVAIME GNQVKVIENS EGTRTTPSII AYMDDNEVLV GAPAKRQSVT 
NPRNTLFAVK RLIGRRFEEK EVQKDIGLMP YAIIKADNGD AWVEAHGEKL APPQVSAEVL 
RKMKKTAEDY LGEPVTEAVI TVPAYFNDSQ RQATKDAGRI AGLEVKRIIN EPTAAALAFG 
LDKAEKGDRK IAVYDLGGGT FDVSIIEIAD VDGEMQFEVL STNGDTFLGG EDFDQRIIDY 
IIGEFKKEQG VDLSKDVLAL QRLKEAAEKA KIELSSSQQT EINLPYITAD ASGPKHLNLK 
ITRAKLEALV EDLVERTIEP CRIAIKDAGV KVSDIDDVIL VGGQTRMPKV QEKVKEFFGK 
DPRRDVNPDE AVAVGAAIQG QVLSGDRKDV LLLDVTPLSL GIETLGGVMT KMISKNTTIP 
TKHAQVYSTA DDNQSAVTIK VFQGEREMAA GNKLLGEFNL EGIPPSPRGV PQIEVTFDID 
ANGILHVGAK DKATGKENKI TIKANSGLTD AEIDQMIKDA EANAAEDHKL RELADSRNQG 
DALVHSTKKA LTEYGDKLDA GEKEKIEAAL KSLEDALKDT SADKAAIDAK VEELGQVSQK 
LGEKMYADMQ AQQAGAAGAA GAAEGAAHAG GAQQAADDVV DAEFKEVKKD