| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_0630 |
|---|
| Symbol | |
|---|
| ID | 4308665 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria AMMD |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008390 |
|---|
| Strand | - |
|---|
| Start bp | 705424 |
|---|
| End bp | 706497 |
|---|
| Gene Length | 1074 bp |
|---|
| Protein Length | 357 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 638148424 |
|---|
| Product | phospho-2-dehydro-3-deoxyheptonate aldolase |
|---|
| Protein accession | YP_772523 |
|---|
| Protein GI | 115350684 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0722] 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase |
|---|
| TIGRFAM ID | [TIGR00034] phospho-2-dehydro-3-deoxyheptonate aldolase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.432027 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCCCCGC ACAACACCGA CGACGTCCGC ATTCGCGAAC TCAAGGAACT GACGCCGCCC
GCCCATCTGA TCCGCGAATT CGCGTGCTCC GAGGCCGCGT CCGAGCTGAT CTACCACTCG
CGCCAGTCGA TGCACCGCAT CCTGCACGGG ATGGACGACC GGCTGATCGT CGTGATCGGG
CCGTGCTCGA TCCACGATAC GAAGGCGGCG ATCGAGTACG CGGGGCGGCT CGTGAAGGAG
CGCGAGCGCT TCAAGGGCGA GCTGGAAATC GTGATGCGCG TGTACTTCGA GAAGCCGCGC
ACGACGGTCG GCTGGAAGGG GCTCATCAAC GATCCGCACC TGGACAACAG CTTCAAGATC
AACGAAGGAC TGCGCACCGC GCGTGAACTG CTGCTGCAGA TCAACGAGAT GGGGCTGCCG
GCCGCGACCG AATACCTCGA CATGATCAGC CCGCAGTACA TCGCCGACCT GATCTCGTGG
GGCGCGATCG GCGCGCGCAC GACCGAGTCG CAGGTGCACC GCGAGCTGGC GTCGGGGCTG
TCGTGCCCGG TCGGCTTCAA GAACGGCACC GACGGCAACG TGAAGATCGC GGTCGATGCG
ATCAAGGCCG CGTCGCAGCC GCATCATTTC CTGTCGGTGA CCAAGGGCGG CCACTCGGCG
ATCGTGTCGA CGGCCGGCAA CGAGGACTGC CACGTGATCC TGCGCGGCGG CAAGACGCCG
AACTACGACG CGGACAGCGT GAACGCCGCA TGCGCGGACA TCGGCAAGGC CGGCCTCGCC
GCGCGCCTGA TGATCGACGC GAGCCACGCG AACAGCTCGA AGAAGCACGA GAACCAGATT
CCCGTGTGCG CGGACATCGG CCGCCAGGTC GCGGCCGGCG ACGAGCGCAT CGTTGGCGTG
ATGATCGAGT CGCACCTCGT CGAAGGGCGT CAGGACCTGA AGGAAGGCTG CCCGCTGACC
TACGGCCAGA GCATCACCGA TGCGTGCATC GCGTGGGACG ACAGCGTGAA GGTGCTCGAA
GGCCTCGCGG AATCGGTGAA GGCACGCCGC GTCGCGCGCG GCAGCGGGAA CTGA
|
|---|
| Protein sequence | MPPHNTDDVR IRELKELTPP AHLIREFACS EAASELIYHS RQSMHRILHG MDDRLIVVIG
PCSIHDTKAA IEYAGRLVKE RERFKGELEI VMRVYFEKPR TTVGWKGLIN DPHLDNSFKI
NEGLRTAREL LLQINEMGLP AATEYLDMIS PQYIADLISW GAIGARTTES QVHRELASGL
SCPVGFKNGT DGNVKIAVDA IKAASQPHHF LSVTKGGHSA IVSTAGNEDC HVILRGGKTP
NYDADSVNAA CADIGKAGLA ARLMIDASHA NSSKKHENQI PVCADIGRQV AAGDERIVGV
MIESHLVEGR QDLKEGCPLT YGQSITDACI AWDDSVKVLE GLAESVKARR VARGSGN
|
|---|
| |