Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bamb_0622 |
Symbol | glcF |
ID | 4308657 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria AMMD |
Kingdom | Bacteria |
Replicon accession | NC_008390 |
Strand | - |
Start bp | 696897 |
End bp | 698123 |
Gene Length | 1227 bp |
Protein Length | 408 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 638148416 |
Product | glycolate oxidase iron-sulfur subunit |
Protein accession | YP_772515 |
Protein GI | 115350676 |
COG category | [C] Energy production and conversion |
COG ID | [COG0247] Fe-S oxidoreductase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.0494165 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAAACCA ACCTCGCCGA TTTCATCCGC AACACGCCCG ACGGCGACGA GGCCGACGCG ATCCTGCGCA AGTGCGTGCA TTGCGGCTTC TGCACCGCGA CGTGCCCGAC CTACCAGTTG CTCGGCGACG AACTCGACGG CCCGCGCGGG CGCATCTACC TGATCAAGCA GATGGTCGAA GGCGCGCCCG TCACGCGCAG CACGCAACAG CACCTCGATC GCTGCCTCAC GTGCCGCAGC TGCGAGACTA CCTGCCCGTC GGGGGTTCAG TACGGCCGGC TCGTCGAGAT CGGCCGCAAG CACGTCGAGG CGCAGGTGCA GCGCCCGGTG CAGCAGCGAA TCCTGCGCCG CGTGCTCGCG AGCCTCGTGC CGAACGCGGC GCTGTTCTCG CCGGTCATGC GGCTCGGCCA GCACGTGCGG CCGCTGTTGC CGAAACGGCT GCGCGACAAG GTACCGCCGC GCCAGCGGCT GCTCGAATGG CCGCAGCGCA CGCATCCGCG CAAGATGCTG ATGCTCGGCG GCTGCGTGCA GCCGTCGATG CTGCCGAACA TCAACATCGC GACCGCGCGC GTACTCGACG CACTCGGCGT CGAGACGATC GTCGCGCCCG ACGCGGGCTG CTGCGGCGCG ATCCGCCTGC ACCTGAACTA TCACGACGAA GCGCTCGCCG ACGCACGCCG CAACATCGAC GCGTGGTGGC CGTATATCGA GCAAGGTGCC GAAGCGATCG TCATGAACGC ATCGGGCTGC GGCGCGACGG TGCTCGAATA TGCGCACCTG CTGCGTGACG ATCCGGCCTA TGCGGAAAGA GCGCAGCGCA TCGTCGCGCT GACGCGCGAC ATCTCCGACG TGCTGCTCGC GTTCGAGGCC GAGATCGCGA CGCTCGCGCG ACGCCGCGCG ATCCATACCG TCGCGTACCA CCCGCCGTGC ACGCTGCAGC ACGGCCAGCA GTCGCGCGGC AAGGTCGAGC GCCTGCTCGA GACGCTCGGC ATCGAGGTGC GGCTGCCGGC CGACAGCCAC CTGTGCTGCG GGTCGGCCGG CACCTATTCG CTGACGCAGC CGTCGCTGTC GTACCGGCTG CGCAAGCAGA AGCTGCTGAA GCTGCAGGCA CTCGAGCCGC AGATGATCGT GTCCGGCAAC GTCGGCTGCA TCGCGCACCT GCAGAGCGGC ACGCAGATTC CGGTCGCGCA CTGGATCCAA CTCGTCGAGC ATCTGCTGTA CGGCTAG
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Protein sequence | MQTNLADFIR NTPDGDEADA ILRKCVHCGF CTATCPTYQL LGDELDGPRG RIYLIKQMVE GAPVTRSTQQ HLDRCLTCRS CETTCPSGVQ YGRLVEIGRK HVEAQVQRPV QQRILRRVLA SLVPNAALFS PVMRLGQHVR PLLPKRLRDK VPPRQRLLEW PQRTHPRKML MLGGCVQPSM LPNINIATAR VLDALGVETI VAPDAGCCGA IRLHLNYHDE ALADARRNID AWWPYIEQGA EAIVMNASGC GATVLEYAHL LRDDPAYAER AQRIVALTRD ISDVLLAFEA EIATLARRRA IHTVAYHPPC TLQHGQQSRG KVERLLETLG IEVRLPADSH LCCGSAGTYS LTQPSLSYRL RKQKLLKLQA LEPQMIVSGN VGCIAHLQSG TQIPVAHWIQ LVEHLLYG
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