| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_0609 |
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| Symbol | secF |
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| ID | 4311550 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008390 |
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| Strand | - |
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| Start bp | 680738 |
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| End bp | 681688 |
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| Gene Length | 951 bp |
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| Protein Length | 316 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 638148403 |
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| Product | preprotein translocase subunit SecF |
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| Protein accession | YP_772502 |
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| Protein GI | 115350663 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0341] Preprotein translocase subunit SecF |
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| TIGRFAM ID | [TIGR00916] protein-export membrane protein, SecD/SecF family
[TIGR00966] protein-export membrane protein SecF |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAATTTT TCCGCATCCG TAAAGACATT CCGTTCATGC GGCACGCGCT GGTGTTCAAC
GTGATCTCGC TGGTCACGTT CCTCGCCGCC GTGTTCTTCC TGTTCCACCG CGGGCTGCAC
CTGTCCGTCG AATTCACCGG CGGTACGGTG ATCGAGGTCC AGTACCAGCA GGCCGCGCAG
CTCGAGCCCG TGCGTGCCAC GCTCGGCAAG CTCGGCTACG CCGATGCGCA GGTGCAGAAC
TTCGGCACGT CGCGCAACGT GCTGATCCGC CTGCAGCTGA AGGAAGGCCT CACGTCCGCG
CAGCAGAGCG ATCAGGTGAT GACCGCACTG AAGGCGCAGA GCCCCGACGT GTCGCTGCAG
CGCGTCGAGT TCGTCGGCCC GCAGGTCGGC CGCGAGCTCG CGACCGACGG TCTCCTCGCG
CTCGCGTGCG TCGTGATCGG CATCGTGATC TACCTGTCGA TCCGCTTCGA ATGGAAGTAC
GCGGTCGCCG GCATCATCGC GAACCTGCAC GACGTCGTGA TCATTCTCGG CTTCTTCGCG
TTCTTCCAGT GGGAGTTCTC GCTGGCGGTG CTCGCGGCGA TCCTCGCGGT GCTCGGCTAT
TCGGTCAACG AGTCGGTCGT CATCTTCGAC CGGATCCGCG AAACGTTCCG CCGCGAACGC
AGGATGAGCG TGTCGGAAGT GATCAACCAC GCGATCACGA CGACGATGTC GCGCACGATC
ATCACGCACA CGTCGACGGA AATGATGGTG CTGTCGATGT TCTTCTTCGG CGGCCCGACG
CTGCACTACT TCGCGCTCGC GCTGACGGTC GGCATCATGT TCGGCATCTA CTCGTCGGTG
TTCGTCGCGG GCTCGCTCGC GATGTGGCTC GGCATCAAGC GCGAAGACCT GATCAAGGAA
AAGAAGGGCG CACACGATCC GGACGATCCG AACGCGGGCG CGCAGGTTTG A
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| Protein sequence | MEFFRIRKDI PFMRHALVFN VISLVTFLAA VFFLFHRGLH LSVEFTGGTV IEVQYQQAAQ
LEPVRATLGK LGYADAQVQN FGTSRNVLIR LQLKEGLTSA QQSDQVMTAL KAQSPDVSLQ
RVEFVGPQVG RELATDGLLA LACVVIGIVI YLSIRFEWKY AVAGIIANLH DVVIILGFFA
FFQWEFSLAV LAAILAVLGY SVNESVVIFD RIRETFRRER RMSVSEVINH AITTTMSRTI
ITHTSTEMMV LSMFFFGGPT LHYFALALTV GIMFGIYSSV FVAGSLAMWL GIKREDLIKE
KKGAHDPDDP NAGAQV
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