Gene Bamb_0596 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_0596 
Symbol 
ID4308543 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008390 
Strand- 
Start bp667989 
End bp668675 
Gene Length687 bp 
Protein Length228 aa 
Translation table11 
GC content71% 
IMG OID638148390 
Producthelix-turn-helix, type 11 domain-containing protein 
Protein accessionYP_772489 
Protein GI115350650 
COG category[K] Transcription 
COG ID[COG2378] Predicted transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGCGCC GTGCCGACCG CCTGTTCCAG ATCGCCGAGC TGCTGCGCGG GCGGCGTCTC 
ACGACCGCGC AGCAGCTCGC CGACTGGCTG TCGGTGTCGC CGCGCACGGT CTATCGCGAC 
GTGCGCGACC TGCAATTGTC AGGGGTGCCG ATCGAAGGCG AAGCCGGCAT CGGCTACCGG 
CTGAACCGCA ACGCGAGCCT GCCGCCGCTC ACGTTCACGG CCGAGGAACT CGCGGCGCTC 
GCGGTCGGCG CGCGGATGCT CGAGACCTGG GGCGGCGCAC GCTTCGCGGG TGGCGCACGC 
TCGGCGCTCG CGAAGATCGC GTCGGCGATG CCGGCCGACA AGCGCACGGC GCTCGACCGC 
CTGCCGGTGT TCGCGCCGTC GTTCCACATC GACGAGACGT TCTGCGCGAA GGTCGACGCG 
ATCCACCAGG CGGTCGACAC GCACCACATC GTCAGCTTCG ACTACCGCGA CCGGCTCGGC 
GCGCATACGC GGCGCCGCGT GTGGCCGCTC GGGCTCGTCT ACTGGGGCGG ACGCTGGACG 
ATCGGCGCGT GGTGCGAACT GCGCGGCGAC TTCCGCACCT TCGACATCGC GCGCATGGGC 
GACATCACCG TGCACGAGCA GTTTCCGGAC ATGGAAGGCC GGCGGATCGC CGACTACATG 
CGGATCGCGG AAGCGCCGAT GCGCTGA
 
Protein sequence
MTRRADRLFQ IAELLRGRRL TTAQQLADWL SVSPRTVYRD VRDLQLSGVP IEGEAGIGYR 
LNRNASLPPL TFTAEELAAL AVGARMLETW GGARFAGGAR SALAKIASAM PADKRTALDR 
LPVFAPSFHI DETFCAKVDA IHQAVDTHHI VSFDYRDRLG AHTRRRVWPL GLVYWGGRWT 
IGAWCELRGD FRTFDIARMG DITVHEQFPD MEGRRIADYM RIAEAPMR