Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bamb_0591 |
Symbol | mnmA |
ID | 4308538 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria AMMD |
Kingdom | Bacteria |
Replicon accession | NC_008390 |
Strand | - |
Start bp | 663887 |
End bp | 665041 |
Gene Length | 1155 bp |
Protein Length | 384 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 638148385 |
Product | tRNA-specific 2-thiouridylase MnmA |
Protein accession | YP_772484 |
Protein GI | 115350645 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0482] Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase, contains the PP-loop ATPase domain |
TIGRFAM ID | [TIGR00420] tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCAAGC GCCGTGTAGT AGTGGGCATG TCGGGCGGCG TCGATTCGTC GGTGACCGCG TGGCTGCTGA AGGAACAAGG GTACGACGTG GTCGGCCTGT TCATGAAGAA CTGGGAAGAC GACGACGACG GCGAATACTG CTCGACGCGC CAGGACTGGA TCGACGTCGT GTCGGTTGCT GACCTGATCG GCATCGACGT GGAAGCGGTG AACTTCGCGG CCGAATACAA GGACCGCGTG TTCGCCGAAT TCCTGCGCGA ATACTCGGCG GGCCGCACGC CGAACCCGGA CGTGCTGTGC AACGCCGAGA TCAAGTTCAA GGCGTTCCTC GATCACGCAA TGTCGCTCGA CGCGGAAATG ATCGCGACCG GCCACTACGC GCGCGTGCGC GAGCGCGACG GTCGCTTCGA ACTGCTGAAG GCGTTCGATC ATACGAAAGA CCAGTCGTAC TTCCTGCACC GGCTGAACCA GGCGCAACTG TCGAAGACGA TGTTCCCGCT CGGCGAGATC CCGAAGACGA AGGTGCGCGA GATCGCCGCG CAGATCGGCC TGCCGAACGC GAAGAAGAAG GACTCGACGG GCATCTGCTT CATCGGGGAA CGGCCGTTCC GCGACTTCCT GAACCGCTAT CTTCCGACGA AACCGGGCCC GATGAAGACG CCGGACGGCA AGGTGATCGG CGAGCACATC GGCCTCGCGT TCTACACGTT CGGCCAGCGC AAGGGCATCG GCCTCGGCGG CAGCAAGGAC GGCAGCGGCG AACCGTGGTT CGTCGCCGCG AAGGACATCG CGTCGAACAC GCTGTACGTC GTGCAGGGCC ACGACCATCC ATGGCTGCTG TCCCGCCAGC TCGTCGCCGG CAACGTAAGC TGGGTCGCGG GCGAGCCGCC GGCCGATGGC TTCTCGTGCG GCGCGAAGAC GCGCTACCGG CAGGCCGACG CCGCGTGTTC CTTCGGCCGC GCCGACGGCG AGCGCTTCTC GCTCGCGTTC GACGACGCGC AATGGGCGGT GACGCCCGGC CAGTCGGCCG TGCTGTACGA CGGCGAGATC TGCCTGGGCG GCGGCATCAT CGAGTTCGCG GCCACCGGCC AACCCGGCCA GACGGCGCCG GCACCGGCGG CGGGCCACAC CGGCGCGCTG GCCGAAGCAC GCTGA
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Protein sequence | MTKRRVVVGM SGGVDSSVTA WLLKEQGYDV VGLFMKNWED DDDGEYCSTR QDWIDVVSVA DLIGIDVEAV NFAAEYKDRV FAEFLREYSA GRTPNPDVLC NAEIKFKAFL DHAMSLDAEM IATGHYARVR ERDGRFELLK AFDHTKDQSY FLHRLNQAQL SKTMFPLGEI PKTKVREIAA QIGLPNAKKK DSTGICFIGE RPFRDFLNRY LPTKPGPMKT PDGKVIGEHI GLAFYTFGQR KGIGLGGSKD GSGEPWFVAA KDIASNTLYV VQGHDHPWLL SRQLVAGNVS WVAGEPPADG FSCGAKTRYR QADAACSFGR ADGERFSLAF DDAQWAVTPG QSAVLYDGEI CLGGGIIEFA ATGQPGQTAP APAAGHTGAL AEAR
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