Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bamb_0586 |
Symbol | |
ID | 4308533 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria AMMD |
Kingdom | Bacteria |
Replicon accession | NC_008390 |
Strand | - |
Start bp | 657382 |
End bp | 658449 |
Gene Length | 1068 bp |
Protein Length | 355 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 638148380 |
Product | nifR3 family TIM-barrel protein |
Protein accession | YP_772479 |
Protein GI | 115350640 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0042] tRNA-dihydrouridine synthase |
TIGRFAM ID | [TIGR00737] putative TIM-barrel protein, nifR3 family |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.153913 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCCGTTA TCGGCTCTCA CGTTTTGCGT AACAACCTGT TCGTCGCGCC GATGGCCGGC GTGACGGATC GTCCGTTCCG CCAGCTGTGC AAGCGGCTGG GGGCCGGGTA CGCCGTGTCC GAGATGGTCG CGTCCAATGC GCAGCTGTGG AAAAGCGCGA AGACGATGCG GCGGGCGAAC CACGAAGGCG AAGTCGAGCC GATCGCGGTG CAGATCGCCG GCGCCGATCC CGCGATGATG GCCGAAGCGG CCCGCTACAA CGTCGACAAC GGCGCGCAGA TCATCGACAT CAACATGGGC TGCCCGGCGA AGAAGGTCTG CAACGTCGCG GCCGGCTCCG CGCTGCTGCA GAACGAGCCG CTCGTGCAGC GGATCGTCGA GGCCGTGGTC GCGGCGGTGG GCACCGGGCC GGATGCGGTG CCCGTCACGC TGAAGATCCG CACCGGCTGG GATCGCGAGC ACAAGAACGC GATCACGGTC GCGCGCCTCG CCGAAGCGGC CGGCATCTCG ATGCTGACCG TGCACGGCCG CACGCGTGCC GACCTCTACC GCGGCGACGC CGAATACGAC ACCATCGCGG CCGTGAAGGC GGCCGTGCGC ATCCCGGTCG TCGCGAACGG CGACATCACG TCGCCGGCGA AAGCGAAGGC CGTGCTCGAC GCAACCGGCG CCGACGCACT GATGATCGGT CGCGCCGCGC AAGGCCGGCC GTGGCTGTTC CGTGAAATCG ATCATTTCCT GCAAACCGGC GAGCTGCTGC CCCCGCCGCG GATCGACGAG ATCCAGCACG TGATGAACGA ACACCTGGAA GACCACTACG CGTTCTACGG TGAATTCACG GGAGTCCGTA CTGCGCGCAA GCACATCGGC TGGTACACTC GCGGCCTTTC CGGTGCCAAC GGGTTCCGGC ACAGGATGAA CACGCTCGAT TCCACCCGCG AGCAGCTCGC CGCCGTCAAT GCATTCTTCG AGGCGCAAAA AGCGCTGTCG GACCACCTCG TCTACGTCGA TGACGAAGAG GAAAACGGCC AGGGCGAGTC GGACGACCAT AACCAGTTAG CAGCATGA
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Protein sequence | MPVIGSHVLR NNLFVAPMAG VTDRPFRQLC KRLGAGYAVS EMVASNAQLW KSAKTMRRAN HEGEVEPIAV QIAGADPAMM AEAARYNVDN GAQIIDINMG CPAKKVCNVA AGSALLQNEP LVQRIVEAVV AAVGTGPDAV PVTLKIRTGW DREHKNAITV ARLAEAAGIS MLTVHGRTRA DLYRGDAEYD TIAAVKAAVR IPVVANGDIT SPAKAKAVLD ATGADALMIG RAAQGRPWLF REIDHFLQTG ELLPPPRIDE IQHVMNEHLE DHYAFYGEFT GVRTARKHIG WYTRGLSGAN GFRHRMNTLD STREQLAAVN AFFEAQKALS DHLVYVDDEE ENGQGESDDH NQLAA
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