Gene Bamb_0578 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_0578 
Symbol 
ID4308971 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008390 
Strand+ 
Start bp650673 
End bp651131 
Gene Length459 bp 
Protein Length152 aa 
Translation table11 
GC content71% 
IMG OID638148372 
ProductD-tyrosyl-tRNA(Tyr) deacylase 
Protein accessionYP_772471 
Protein GI115350632 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1490] D-Tyr-tRNAtyr deacylase 
TIGRFAM ID[TIGR00256] D-tyrosyl-tRNA(Tyr) deacylase 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.354763 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATCGCGC TGATCCAGCG CGTGAAGCGT GCCGACGTGC GCGTCGGCGA CCGCACGACG 
GGCGAGATCG GCGCGGGCCT GCTCGCGCTC GTCTGCGCGG AGCGCGGCGA CAACGAGGCC 
GCGGCCGACA AGCTCCTCGC GAAGCTGCTC GGCTATCGTG TGTTCAGCGA CGCGGCCGGC 
AAGATGAACC TGCCGGTGTC GAACATCGAT GGCGCCGGTG GCGCTGGCGG CCTGCTGCTC 
GTGTCGCAGT TCACGCTCGC GGCCGATACC AACAGCGGGC TGCGGCCGAG CTTCACGCCG 
GCCGCGCCGC CCGACGAAGG CGCGCGCCTG TTCGACTATT TCGTCGCGGC CGCGCGCGAG 
CGCCATCCGG TCGTCGAGAC GGGCGAGTTC GGCGCCGACA TGCAGGTGTC GCTCGTCAAC 
GACGGCCCCG TGACGTTCTG GCTGCAAGTG CGGCCCTGA
 
Protein sequence
MIALIQRVKR ADVRVGDRTT GEIGAGLLAL VCAERGDNEA AADKLLAKLL GYRVFSDAAG 
KMNLPVSNID GAGGAGGLLL VSQFTLAADT NSGLRPSFTP AAPPDEGARL FDYFVAAARE 
RHPVVETGEF GADMQVSLVN DGPVTFWLQV RP