| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_0555 |
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| Symbol | |
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| ID | 4308696 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008390 |
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| Strand | + |
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| Start bp | 621643 |
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| End bp | 623499 |
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| Gene Length | 1857 bp |
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| Protein Length | 618 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 638148349 |
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| Product | phosphogluconate dehydratase |
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| Protein accession | YP_772448 |
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| Protein GI | 115350609 |
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| COG category | [E] Amino acid transport and metabolism
[G] Carbohydrate transport and metabolism |
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| COG ID | [COG0129] Dihydroxyacid dehydratase/phosphogluconate dehydratase |
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| TIGRFAM ID | [TIGR00110] dihydroxy-acid dehydratase
[TIGR01196] 6-phosphogluconate dehydratase |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.782141 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACGTCGC TGCACCCCAC TCTGGCGAAA GTCACCGAAC GCGTGATCGC CCGCAGCCAA
TCGACCCGTT CCGCCTATCT GCAGCGCATC GACGGCGCGC AAGGCAAGTT CCCGGCGCGC
GGCGCGCTGT CGTGCGCGAA CCTCGCGCAC GGCTTCGCGG GTCTCGAAGG CAGCGACAAG
TTCCAGATCA AGGCAATCCG CGAGCCGAAC ATCGGCATCG TGTCCTCGTA CAACGAGATG
CTGTCCGCGC ACGCGCCGTA CAAGGATTTC CCCGACATCA TCAAGGCCGC CGCGCGCGAG
AACGGCGGCG TCGCGCAATT CGCGGGCGGC GTGCCGGCGA TGTGCGACGG CGTCACGCAG
GGCAACCCCG GGATGGAGCT GTCGCTGTTC TCACGCGAGG CGATCGCGAT GGGCACGGCG
ATCGCGCTCA CGCACAACAT GTTCGACACG GCGCTCTGCC TCGGCATCTG CGACAAGATC
GTGCCGGGCC TGCTGATCGG CGCGCTGCAG TTCGGCCACC TGCCGACCAT CTTCGTGCCG
GCCGGCCCGA TGACGAGCGG CCTGTCGAAC GACGACAAGG CGAAGATCCG CCAGCAGTTC
GCGACGGGCC AAGTGGGCCG CGACGCGCTG CTCGAAGCCG AATCGGCCGC GTATCACGGC
CACGGCACCT GCACGTTCTA CGGCACCGCG AACAGCAACC AGATGCTGAT GGAGCTGATG
GGCCTGCACC TGCCGGGCTC GGCGTTCGTC CATCCGCACA CGCCGCTGCG CGACGCGCTG
ACCGCCGAAG CCGCGCGCCG CGTGCTCGAC CTGACGGTCG AGCGCGGCCA GTACACGCCG
ATCGGCCATG TGATCGACGA GAAGGCGATC GTCAACGGGA TCGTCGCGCT GCTCGCGACA
GGCGGCTCGA CCAACCACAC GCTGCACCTC GTCGCGATCG CGCGTGCGGC CGGCGTGCTG
ATCGACTGGA ACGATTTCGA CGAGCTGTCG GCCGTCGTGC CGCTGCTCGC GAAGATCTAC
CCGAACGGCA AGGCGGACGT GAACCATTTC CACGCGGCGG GTGGCGTTGC GTTCCTGGTG
CGCAACCTGC TCGAAGGCGG GCTGCTGCAC GAAGACGTGA CGACGGTCGC CGGCCGTGGC
CTGTCGCACT ACACGAAGGA GCCGAAGCTG ATCGACGGCA AGCTGACGTG GGTCGACGGC
ACGGCCGAGA GCCACGATAC GAAGGTGCTG CGCGGCATTC GCGAGCCGTT CCAGCCGGAC
GGCGGCCTGC GCCTGATGCA GGGCCGGCTC GGCCGCGGCG TGATCAAGAT TTCGGCGGTC
GCGCCCGAGC ACCGCAAGGT GACGGCGCCC GCGATCGTGT TCGATTCGCA GGAAGCCGTG
CAGGCGGCAT TCGATCGCGG CGAGCTGAAG CGCGATTTCG TCGCGGTCGT GCGCTTCCAG
GGCGCGCGCG CGAACGGGAT GCCCGAGCTG CACCGTTTGA CGCCGCTGCT CGGCGTGCTG
CAGGATCAGG GCTTCCACGT CGCGCTCGTC ACCGACGGCC GCATGTCCGG CGCATCGGGC
AAGGTGCCGG CGGTGATCCA CGTGTCGCCG GAAGCGCTGC TGGCCGGCCC GCTGGGCAAG
GTGCAGACGG GCGACACGCT CGTGATCGAC GCGGAAGCCG GCATTCTCGA CATCGAGGTC
GACGAAGCCG AGTGGCAAGC GCGCGCGGTC GCGCAGCCGC TGCACCAGGC CGACAACGAG
ACGGGTTTCG GGCGCGAACT GTTCGGCGTG TTCCGCGCGG CGGCCGCGCC GGCCGAGCAG
GGCGCATCGG TTTTCGGAAC GCTGGTCGGC GAAACGGCCG TCGGCGTCGC TGCATGA
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| Protein sequence | MTSLHPTLAK VTERVIARSQ STRSAYLQRI DGAQGKFPAR GALSCANLAH GFAGLEGSDK
FQIKAIREPN IGIVSSYNEM LSAHAPYKDF PDIIKAAARE NGGVAQFAGG VPAMCDGVTQ
GNPGMELSLF SREAIAMGTA IALTHNMFDT ALCLGICDKI VPGLLIGALQ FGHLPTIFVP
AGPMTSGLSN DDKAKIRQQF ATGQVGRDAL LEAESAAYHG HGTCTFYGTA NSNQMLMELM
GLHLPGSAFV HPHTPLRDAL TAEAARRVLD LTVERGQYTP IGHVIDEKAI VNGIVALLAT
GGSTNHTLHL VAIARAAGVL IDWNDFDELS AVVPLLAKIY PNGKADVNHF HAAGGVAFLV
RNLLEGGLLH EDVTTVAGRG LSHYTKEPKL IDGKLTWVDG TAESHDTKVL RGIREPFQPD
GGLRLMQGRL GRGVIKISAV APEHRKVTAP AIVFDSQEAV QAAFDRGELK RDFVAVVRFQ
GARANGMPEL HRLTPLLGVL QDQGFHVALV TDGRMSGASG KVPAVIHVSP EALLAGPLGK
VQTGDTLVID AEAGILDIEV DEAEWQARAV AQPLHQADNE TGFGRELFGV FRAAAAPAEQ
GASVFGTLVG ETAVGVAA
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