Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bamb_0548 |
Symbol | |
ID | 4308689 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria AMMD |
Kingdom | Bacteria |
Replicon accession | NC_008390 |
Strand | + |
Start bp | 613519 |
End bp | 613974 |
Gene Length | 456 bp |
Protein Length | 151 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 638148342 |
Product | biopolymer transport protein ExbD/TolR |
Protein accession | YP_772441 |
Protein GI | 115350602 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0848] Biopolymer transport protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.268527 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCATTCG GCGGACTGGA GCACCACAAG ACATCCGCGC CGATGGCGGA GATCAACATG ACGCCGCTGA TCGACGTGAT GCTCGTGCTG CTCGTCATCT TCATCATTAC CGCGCCGCTG ATGACGCACG CGATCCGGCT CGACCTGCCG AAGGTCGCGG CCGGCGTCGC GCGCGATACG CCGCAATCGG TCACGCTGTC GATCGACGAC GCCGGCAAGC TGTACTGGGA CGACACACCC GTCGCACTCG ACGCGCTGCC GGCGCGCTTT CAGGCCGCCG CCGCGGGCGC CGCGCCGCCC GAGCTGCGGC TGCGCGCGTC GCGCGCGACC CGCTACGACG TGATCGCGCA GGTGATGGGC GCCGCGCAGG CCGCGGGCCT CACGCGAATC GGCTTCGTCA CCGACGTGCC GCCGGCGGGC GCCGCCGCGC CGGCCGCCGC GGGCGCGAAA CCCTGA
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Protein sequence | MAFGGLEHHK TSAPMAEINM TPLIDVMLVL LVIFIITAPL MTHAIRLDLP KVAAGVARDT PQSVTLSIDD AGKLYWDDTP VALDALPARF QAAAAGAAPP ELRLRASRAT RYDVIAQVMG AAQAAGLTRI GFVTDVPPAG AAAPAAAGAK P
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