Gene Bamb_0548 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_0548 
Symbol 
ID4308689 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008390 
Strand
Start bp613519 
End bp613974 
Gene Length456 bp 
Protein Length151 aa 
Translation table11 
GC content72% 
IMG OID638148342 
Productbiopolymer transport protein ExbD/TolR 
Protein accessionYP_772441 
Protein GI115350602 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0848] Biopolymer transport protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.268527 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCATTCG GCGGACTGGA GCACCACAAG ACATCCGCGC CGATGGCGGA GATCAACATG 
ACGCCGCTGA TCGACGTGAT GCTCGTGCTG CTCGTCATCT TCATCATTAC CGCGCCGCTG
ATGACGCACG CGATCCGGCT CGACCTGCCG AAGGTCGCGG CCGGCGTCGC GCGCGATACG
CCGCAATCGG TCACGCTGTC GATCGACGAC GCCGGCAAGC TGTACTGGGA CGACACACCC
GTCGCACTCG ACGCGCTGCC GGCGCGCTTT CAGGCCGCCG CCGCGGGCGC CGCGCCGCCC
GAGCTGCGGC TGCGCGCGTC GCGCGCGACC CGCTACGACG TGATCGCGCA GGTGATGGGC
GCCGCGCAGG CCGCGGGCCT CACGCGAATC GGCTTCGTCA CCGACGTGCC GCCGGCGGGC
GCCGCCGCGC CGGCCGCCGC GGGCGCGAAA CCCTGA
 
Protein sequence
MAFGGLEHHK TSAPMAEINM TPLIDVMLVL LVIFIITAPL MTHAIRLDLP KVAAGVARDT 
PQSVTLSIDD AGKLYWDDTP VALDALPARF QAAAAGAAPP ELRLRASRAT RYDVIAQVMG
AAQAAGLTRI GFVTDVPPAG AAAPAAAGAK P