Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bamb_0541 |
Symbol | |
ID | 4309276 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria AMMD |
Kingdom | Bacteria |
Replicon accession | NC_008390 |
Strand | + |
Start bp | 607407 |
End bp | 608729 |
Gene Length | 1323 bp |
Protein Length | 440 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 638148335 |
Product | C4-dicarboxylate transporter DctA |
Protein accession | YP_772434 |
Protein GI | 115350595 |
COG category | [C] Energy production and conversion |
COG ID | [COG1301] Na+/H+-dicarboxylate symporters |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.0508551 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGTCGAAAT TCCTCAATTC GCTGTTTGGC CGGGTAGTCG TCGCATTGAT ACTGGGGGTC GCGCTCGGCG CGTTTTTCCC GCATTTCGCC GAGTCGCTGC GACCGCTCGG CGACGGCTTC CTGAAGCTCA TCAAGATGGT CATCGGCCCG ATCGTGTTCT GCGTCGTGGT GAGCGGGATG GCCAATGCGG GCGACCTGAA GAAGGTCGGC CGGGTCGGCC TGAAGGCCGT CATCTACTTC GAGGTGATGA CCACGCTCGC GCTCGGCATC GGGCTCGTCC TCGCGTGGCT CACGCGCCCG GGCGTCGGGA TGAACATCGA CCTGCGCTCG CTCGATGCAG CGTCGCTCTC GTCGTACGCG AAGAACGCCG AAAGCCTGAA GGACACGGCC GGCTACCTGA TGAAGATCAT CCCCGAGACC GCGATCGACG CGTTCGCGAA GGGCGACATC CTGCAGATCC TCGTGTTCGC GGTGCTGTTC GGCTCCGCGC TGTCGCTGCT CGGCGACAAG GCGCAGCGCG TGAACAGCCT GATCGAGGAA CTGTCGCACG TGTTCTTCCG CATCATCGGC TTCATCATCA AGCTCGCGCC GCTCGGTGTG CTCGGTGCGA TCGCGTTCAC GACCGGCAAG TACGGCGTCT CGTCGCTCAA GCAGCTCGGC TACCTCGTCG CGGTGTTCTA CCTGAGCTGC ATCGTGTTCG TCACGGTCGT GCTCGGCGTG GTGATGCGGC TCGCGGGCTT CTCGGTGTTC AAGCTGATCC GCTACCTGCG CGAGGAACTG TCGATCGTGC TCGGCACGGC GTCGTCGGAC GCGGTGCTGC CGCAGGTGAT GAGCAAGCTC GAATACATGG GCATCAAGGA TTCGACGGTC GGCCTCGTGA TCCCGACCGG CTATTCGTTC AACCTCGACG GCTTCTCGAT CTACCTGACG CTCGCCGTGC TGTTCATCGC GCAGGCCACC AACACGCCGC TGTCCACGCA TGACCTGATC GTCGTGCTGC TCGTGTCGCT CGTCACGTCG AAGGGCGCGC ACGGGATTCC GGGTTCGGCG ATCGTGATTC TCGCGGCGAC GCTGTCGGCG ATTCCCGCGA TTCCGGTGCT CGGCCTCGTG CTGATCCTGC CGGTCGACTG GTTCGTCGGC ATCGCCCGCG CGCTGACCAA CCTGATCGGC AACTGCGTCG CGACGGTGGT CGTCGCGGTG TGGGAGAACG ACATCGACCG GGCCCGCGCG ACGCGCGTGC TGAACCGCGA GCTGCGCTAC GTGGCGGTCG ACGCGCAGGG CAGCAGCGCA CCGGTCGCCG GCGACCAGGC TCACGCGCTC TGA
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Protein sequence | MSKFLNSLFG RVVVALILGV ALGAFFPHFA ESLRPLGDGF LKLIKMVIGP IVFCVVVSGM ANAGDLKKVG RVGLKAVIYF EVMTTLALGI GLVLAWLTRP GVGMNIDLRS LDAASLSSYA KNAESLKDTA GYLMKIIPET AIDAFAKGDI LQILVFAVLF GSALSLLGDK AQRVNSLIEE LSHVFFRIIG FIIKLAPLGV LGAIAFTTGK YGVSSLKQLG YLVAVFYLSC IVFVTVVLGV VMRLAGFSVF KLIRYLREEL SIVLGTASSD AVLPQVMSKL EYMGIKDSTV GLVIPTGYSF NLDGFSIYLT LAVLFIAQAT NTPLSTHDLI VVLLVSLVTS KGAHGIPGSA IVILAATLSA IPAIPVLGLV LILPVDWFVG IARALTNLIG NCVATVVVAV WENDIDRARA TRVLNRELRY VAVDAQGSSA PVAGDQAHAL
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