Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bamb_0537 |
Symbol | |
ID | 4309272 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria AMMD |
Kingdom | Bacteria |
Replicon accession | NC_008390 |
Strand | - |
Start bp | 602118 |
End bp | 602975 |
Gene Length | 858 bp |
Protein Length | 285 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 638148331 |
Product | spermidine synthase |
Protein accession | YP_772430 |
Protein GI | 115350591 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0421] Spermidine synthase |
TIGRFAM ID | [TIGR00417] spermidine synthase |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAGCACGA CTCTCCTCTT CCATCCCACC CCCGACGCCG CCTACGGCTT CCCCAACGCA CGCCGGCTCG CGCACGTCGC GTCGCCGCAC CAGCGCATCG AAGTCTGGGA AACGCCGCAG CTCGGCCGCC TGTTTACGCT GGACGGCCGG CCGATGACGT CGGTCGGCGA CGAATTCGTG TATCACGAGT GCATGACGCA CCCGGCCGCA CTCGCGCATC CGTGCCCGAA GAAGGCGCTC GTGCTCGGCG GCGGCGACGG CGGCGCCGCG CGCCAGTTGC TCAAGCACGC GTGCATCGAG CGGGTCGTCG TCGCGGAGCT CGACGACGAA GTGGTCGGCA TGGCGCGCCG CTATCTCGAC GACGTGCACC AGGGCGCACT CGACGACCCG CGCGTCGAGG TCGTGATCGG CGACGCCGCG CATTTCGTCA CGTCGACCAT CGAGCATTTC GATCTGGTCG TGTTCGACCT CACGCCGCCC GATTCGCCCG CGGCCGGCCT CTATACGCGC GAGTTCTACG CGCAGCTCAA GCGGATCCTC ACGCCGCGCG GCGCGATCTC GATGCACCTC GGCTCGCCGG TGTTCCACGC GGCGCGCATC GCGGCGCTGC TCGACGACCT GCGCGCGAGC TTCGCGTTCG TCGATCCGCT GTCCGCGCAT GTGCCGCTTT ACGGCTCCCA ATGGCTGATG GCGATCGCGA GCGATACGCT CGATGCGGCC GCGCTGTTCG CGCACGACGT CGACGAACGC CTCGCCGCAC GCCGCGTGCA GGGATTGCGC TACTACGATG CGCGACTTCA TGCGGCCCTC TTTGCCCTGC CGTGCGCGCT GCGCGATACA CTGGGCGTTC GCCGCTGA
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Protein sequence | MSTTLLFHPT PDAAYGFPNA RRLAHVASPH QRIEVWETPQ LGRLFTLDGR PMTSVGDEFV YHECMTHPAA LAHPCPKKAL VLGGGDGGAA RQLLKHACIE RVVVAELDDE VVGMARRYLD DVHQGALDDP RVEVVIGDAA HFVTSTIEHF DLVVFDLTPP DSPAAGLYTR EFYAQLKRIL TPRGAISMHL GSPVFHAARI AALLDDLRAS FAFVDPLSAH VPLYGSQWLM AIASDTLDAA ALFAHDVDER LAARRVQGLR YYDARLHAAL FALPCALRDT LGVRR
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