Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bamb_0535 |
Symbol | |
ID | 4309270 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria AMMD |
Kingdom | Bacteria |
Replicon accession | NC_008390 |
Strand | - |
Start bp | 600723 |
End bp | 601490 |
Gene Length | 768 bp |
Protein Length | 255 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 638148329 |
Product | 16S ribosomal RNA methyltransferase RsmE |
Protein accession | YP_772428 |
Protein GI | 115350589 |
COG category | [S] Function unknown |
COG ID | [COG1385] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | [TIGR00046] RNA methyltransferase, RsmE family |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAGTGAAG CCACCACCAC CGCGGCCTTG CCGCGTTTCT TCGTCGAAGC GGCGCTGCGC GCCGATGCGA CGCTCACGCT GCCGGCCGAG GTCGCGCGTC ACGCGCAGGT GCTGCGGCTG CAGCCCGGCG ACACGCTCGC ACTGTTCGAC GGCAGCGGCG GCCAGTACCG CGCGCGGCTC GTCGAGATCG ACAAGCGCAA CGCGCTCGCG CAGATCGAGG CGTTCGACCC GGCCGAGGCG GAGCCGCCGT ATCGCGTGAC GCTCGCGCAG GGCATCGCCG GCGGCGACAA GATGGACTGG GTCATCGAGA AAGCCGTCGA GCTCGGCGTC GCGGCGGTCG TGCCGCTGAC GACCGCGCGC GGCGTCGTGA AACTGTCGGG CGAACGCGCG GACAAGCGCG TCGCGCACTG GCGCGGTGTC GTGCGCGCAT CGTGCGAACA GTGCGGACGC AACCGTGTGC CCGACGTCGC GCCGGTACGC GGCTTCGGCG CGTGGCTCGA TACGCTGCCG GCCGCGCCGG CCGACGGCGA GCTGCGGCTG CTGCTGTCGC CGCGCGCGAG CATTCCGTTC GCGTCGCTGC CCGACGCGCC GCCCGCGGCA GCCGTCACGC TGCTGATCGG GCCGGAAGGC GGACTGTCGC CGGACGAAGA AAACGTGGCC CGCGCGCACG GGTTCACCGC GTTGTCGCTC GGGCCACGCG TGCTGCGCAC CGAGACGGCC GGCGCGGCCG TGCTCGCGGC GCTCGCGGCA CGCTGGGGCG GGTGGTAA
|
Protein sequence | MSEATTTAAL PRFFVEAALR ADATLTLPAE VARHAQVLRL QPGDTLALFD GSGGQYRARL VEIDKRNALA QIEAFDPAEA EPPYRVTLAQ GIAGGDKMDW VIEKAVELGV AAVVPLTTAR GVVKLSGERA DKRVAHWRGV VRASCEQCGR NRVPDVAPVR GFGAWLDTLP AAPADGELRL LLSPRASIPF ASLPDAPPAA AVTLLIGPEG GLSPDEENVA RAHGFTALSL GPRVLRTETA GAAVLAALAA RWGGW
|
| |