Gene Bamb_0535 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_0535 
Symbol 
ID4309270 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008390 
Strand
Start bp600723 
End bp601490 
Gene Length768 bp 
Protein Length255 aa 
Translation table11 
GC content74% 
IMG OID638148329 
Product16S ribosomal RNA methyltransferase RsmE 
Protein accessionYP_772428 
Protein GI115350589 
COG category[S] Function unknown 
COG ID[COG1385] Uncharacterized protein conserved in bacteria 
TIGRFAM ID[TIGR00046] RNA methyltransferase, RsmE family 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTGAAG CCACCACCAC CGCGGCCTTG CCGCGTTTCT TCGTCGAAGC GGCGCTGCGC 
GCCGATGCGA CGCTCACGCT GCCGGCCGAG GTCGCGCGTC ACGCGCAGGT GCTGCGGCTG
CAGCCCGGCG ACACGCTCGC ACTGTTCGAC GGCAGCGGCG GCCAGTACCG CGCGCGGCTC
GTCGAGATCG ACAAGCGCAA CGCGCTCGCG CAGATCGAGG CGTTCGACCC GGCCGAGGCG
GAGCCGCCGT ATCGCGTGAC GCTCGCGCAG GGCATCGCCG GCGGCGACAA GATGGACTGG
GTCATCGAGA AAGCCGTCGA GCTCGGCGTC GCGGCGGTCG TGCCGCTGAC GACCGCGCGC
GGCGTCGTGA AACTGTCGGG CGAACGCGCG GACAAGCGCG TCGCGCACTG GCGCGGTGTC
GTGCGCGCAT CGTGCGAACA GTGCGGACGC AACCGTGTGC CCGACGTCGC GCCGGTACGC
GGCTTCGGCG CGTGGCTCGA TACGCTGCCG GCCGCGCCGG CCGACGGCGA GCTGCGGCTG
CTGCTGTCGC CGCGCGCGAG CATTCCGTTC GCGTCGCTGC CCGACGCGCC GCCCGCGGCA
GCCGTCACGC TGCTGATCGG GCCGGAAGGC GGACTGTCGC CGGACGAAGA AAACGTGGCC
CGCGCGCACG GGTTCACCGC GTTGTCGCTC GGGCCACGCG TGCTGCGCAC CGAGACGGCC
GGCGCGGCCG TGCTCGCGGC GCTCGCGGCA CGCTGGGGCG GGTGGTAA
 
Protein sequence
MSEATTTAAL PRFFVEAALR ADATLTLPAE VARHAQVLRL QPGDTLALFD GSGGQYRARL 
VEIDKRNALA QIEAFDPAEA EPPYRVTLAQ GIAGGDKMDW VIEKAVELGV AAVVPLTTAR
GVVKLSGERA DKRVAHWRGV VRASCEQCGR NRVPDVAPVR GFGAWLDTLP AAPADGELRL
LLSPRASIPF ASLPDAPPAA AVTLLIGPEG GLSPDEENVA RAHGFTALSL GPRVLRTETA
GAAVLAALAA RWGGW