Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bamb_0527 |
Symbol | pyrF |
ID | 4309191 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria AMMD |
Kingdom | Bacteria |
Replicon accession | NC_008390 |
Strand | + |
Start bp | 592530 |
End bp | 593357 |
Gene Length | 828 bp |
Protein Length | 275 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 638148321 |
Product | orotidine 5'-phosphate decarboxylase |
Protein accession | YP_772420 |
Protein GI | 115350581 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0284] Orotidine-5'-phosphate decarboxylase |
TIGRFAM ID | [TIGR02127] orotidine 5'-phosphate decarboxylase, subfamily 2 |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCTTCCC CGCTTACTTT CATCGAATCG CTGCGCGCCG CGTGGCAGCG CACGAATTCG CTGCTGTGCG TCGGCCTCGA TCCCGAGCCG TCGCGCTTTC CCGTGCAGTT CGACGGCCAG CCCGACGCGA TCTTCGAATT CTGCCGGCAG ATCGTCGACG CGACCGCGCC GTATGCGAGC GCGTTCAAGC CGCAGATCGC GTACTTCGCC GCGCATCGCG CCGAAGACCA GCTCGAGCGC CTGATCGCGC ACATCCATCT CCAGCATCCG GGCCTGCCCG TGATTCTCGA CGCGAAGCGC GGCGACATCG GCAGCACCGC CGAGCAGTAC GCGCGCGAGG CGTTCGAGCG CTATCGCGCG GACGCCGTCA CCGTGAACCC GTACATGGGC TACGACTCGG TCGAGCCGTA CTTCGAGCAT GAAGGCAAGG GCGTGATCGT GCTGTGCCGC ACGTCGAACC CGGGTGGCTC GGATCTTCAG TTCCTCGACA CGAACGGCCG GCCGCTGTAC CAGGTCGTGG CCGATCTCGC GGCGAACAAG TGGAACGCGA AGAACGGCCA GCTCGGCCTC GTGGTGGGCG CAACGTTCCC GAACGAAATC GAGATCGTGC GGGGGATCGT CGGCGACATG CCGCTGCTGA TTCCCGGCAT TGGCGCGCAG GGCGGCGATG TGGAGGCCAC CGTCAACGCG GGCCGCACGG CCGACGGCAC CGGGATGATG ATCAACTCGT CGCGCGCGAT CCTGTACGCG AGCAAGGGCG AGGATTTCGC CGAAGCCGCG GCGCTTGCCG CGCAGAAGAC GCGCGACACG ATCAACGCGC ATCGCTGA
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Protein sequence | MSSPLTFIES LRAAWQRTNS LLCVGLDPEP SRFPVQFDGQ PDAIFEFCRQ IVDATAPYAS AFKPQIAYFA AHRAEDQLER LIAHIHLQHP GLPVILDAKR GDIGSTAEQY AREAFERYRA DAVTVNPYMG YDSVEPYFEH EGKGVIVLCR TSNPGGSDLQ FLDTNGRPLY QVVADLAANK WNAKNGQLGL VVGATFPNEI EIVRGIVGDM PLLIPGIGAQ GGDVEATVNA GRTADGTGMM INSSRAILYA SKGEDFAEAA ALAAQKTRDT INAHR
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