| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_0521 |
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| Symbol | |
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| ID | 4309185 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008390 |
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| Strand | + |
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| Start bp | 585942 |
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| End bp | 586724 |
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| Gene Length | 783 bp |
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| Protein Length | 260 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 638148315 |
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| Product | short chain dehydrogenase |
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| Protein accession | YP_772414 |
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| Protein GI | 115350575 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.847891 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATGGGAC GGCTCGCGGG CAAGGTCGCG GTGGTGACGG GCGCGGGCCG CGGGATCGGC
GCCGCGATCG CGCAGGCGTT CGCGCGCGAG GGCGCGGCCG TCGCGCTCGT CGACCTCGAC
TTCCCGCAGG CGCAGCGCAC GGCGGCCGCG ATCGCCGCCG GCATCGACGG CGCGCGCGTG
CTCGCGCTGC ATGCGGACGT CGCGCGGCAG GACTCGGTGC GCGACGCGTT CGCGCAGACC
GAAGCGGCGC TCGGCCCGCT CGACGTGCTG GTGAACAACG CCGGCATCAA CGTGTTCGCC
GATCCGCTGA CGATGACGGA CGACGACTGG CGCCGCTGCT TCGCGGTCGA TCTCGACGGC
GTGTGGCACG GTTGCCGCGC GGCGCTGCCC GGGATGGTCG AACGCGGCCG CGGCAGCATC
GTGAACATCG CGTCGACGCA TGCGTTCCGG ATCATTCCCG GCTGCTTTCC GTACCCGGTC
GCGAAACACG GCGTGCTGGG CCTCACGCGC GCGCTCGGCA TCGAATATGC GGCGCGCAAC
GTGCGGATGA ACGCGATCGC GCCCGGCTAC ATCGAGACGC AGCTCACGCG CGACTGGTGG
GATGCGCAGG CCGACCCGGC CGCGGCGCGC GCCGAGACGC TCGCGCTGCA GCCGATGAAG
CGGATCGGCA AACCGGAGGA AGTCGCGATG ACGGCCGTGT TCCTCGCGTC CGACGAGGCG
CCGTTCATCA ATGCCGCGTG CATCACCGTC GATGGCGGGC GCGCGGCGCT GTACCACGAT
TGA
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| Protein sequence | MMGRLAGKVA VVTGAGRGIG AAIAQAFARE GAAVALVDLD FPQAQRTAAA IAAGIDGARV
LALHADVARQ DSVRDAFAQT EAALGPLDVL VNNAGINVFA DPLTMTDDDW RRCFAVDLDG
VWHGCRAALP GMVERGRGSI VNIASTHAFR IIPGCFPYPV AKHGVLGLTR ALGIEYAARN
VRMNAIAPGY IETQLTRDWW DAQADPAAAR AETLALQPMK RIGKPEEVAM TAVFLASDEA
PFINAACITV DGGRAALYHD
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