| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_0514 |
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| Symbol | aroE |
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| ID | 4309178 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008390 |
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| Strand | + |
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| Start bp | 578841 |
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| End bp | 579707 |
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| Gene Length | 867 bp |
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| Protein Length | 288 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 638148308 |
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| Product | shikimate 5-dehydrogenase |
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| Protein accession | YP_772407 |
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| Protein GI | 115350568 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0169] Shikimate 5-dehydrogenase |
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| TIGRFAM ID | [TIGR00507] shikimate 5-dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCGCGA TCGCGCCGAC GAGCGGCGTC GACCGCTACG TGGTGTTCGG CAATCCGGTG
GCGCACAGCA AGTCGCCGTT CATCCACGCG CAGTTCGCCG CGCAGACGGG CGAGGCGATC
ACTTACGAGC ACCGGCTCGC GCCGGTGGAC GGCTTCGAGG CCGCCGTGCG CGCGTTCGTC
GCCGAAGGCG GGCGCGGCGC GAACGTCACC GTGCCGTTCA AGCTCGACGC GCATGCGCTC
GCCGACACGC TGTCGCCGCG CGCGGCGGCG GCCGGCGCGG TAAACACGCT GCGTTTCGAC
GCCGACGGCC GCATTTACGG CGACAACACC GACGGTGTCG GCCTCGTGCG CGACATCGAA
TCGAATCTCG GCGTGTCGCT CGCAGGCGCG CGCATCCTGC TGCTCGGCGC GGGCGGCGCC
GCCCGCGGCG TCGTGCTGCC GATGCTCGAG CGCGCACCGC TGTCGATCAC GATCGTGAAC
CGCACCGCGA GCAAGGCCGA GACGCTCGTC GGTCAGTTCA CGCAGGCCGC GCACGATGCG
GGCTGCGTGC TGGCGGGCGG CGGCCCGGAC ACCGTACGTG CCGAACCGTA CGACGTGATC
GTCAACGCGA CGGCCGGCAG TCTCGATGCG GCGCTGCCGG AGTGCGACGC TGCCGCGTTC
GGTGCCGGCA CGCTGGCCTA CGACATGATG TATGGCGCGC AGCCGACCGT GTTCATGCAG
CATGCGGCGT CGCTCGGCGC ACGCACGGCC GACGGTCTCG GCATGCTGGT CGAGCAGGCG
GCCGAATCGT TCTTCATCTG GCGCGGCGTG CGGCCGGACG GCGCACCCGT GCTGGCCGCG
CTGCGCCAGG CGCTCGCGGC GGCCTGA
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| Protein sequence | MTAIAPTSGV DRYVVFGNPV AHSKSPFIHA QFAAQTGEAI TYEHRLAPVD GFEAAVRAFV
AEGGRGANVT VPFKLDAHAL ADTLSPRAAA AGAVNTLRFD ADGRIYGDNT DGVGLVRDIE
SNLGVSLAGA RILLLGAGGA ARGVVLPMLE RAPLSITIVN RTASKAETLV GQFTQAAHDA
GCVLAGGGPD TVRAEPYDVI VNATAGSLDA ALPECDAAAF GAGTLAYDMM YGAQPTVFMQ
HAASLGARTA DGLGMLVEQA AESFFIWRGV RPDGAPVLAA LRQALAAA
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