| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_0486 |
|---|
| Symbol | obgE |
|---|
| ID | 4308625 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria AMMD |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008390 |
|---|
| Strand | + |
|---|
| Start bp | 549541 |
|---|
| End bp | 550653 |
|---|
| Gene Length | 1113 bp |
|---|
| Protein Length | 370 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 638148280 |
|---|
| Product | GTPase ObgE |
|---|
| Protein accession | YP_772379 |
|---|
| Protein GI | 115350540 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0536] Predicted GTPase |
|---|
| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR02729] Obg family GTPase CgtA |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.165624 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAGTTCA TTGACGAAGC ACGAATCGAA GTCATCGCCG GCGACGGAGG TGATGGGAGC
GCGTCGATGC GCCGCGAAAA GTTCGTTCCG TTCGGCGGGC CGGACGGCGG CGACGGCGGC
CGGGGCGGCA ACGTCTACGC GATTGCCGAC CGCAACATCA ACACGCTGAT CGACTACCGT
TACGCGAAGA AGCACCTGGC GCGCAACGGC GAAAACGGTC GCGGCTCGGA TTGCTACGGC
AAGGGCGGTG ACGACGTCAC GCTGCGCATG CCGGTCGGCA CGGTCGTGAC CGACATGGAT
ACCGGCGAGC TGATCGCCGA CCTGACCGAG CACGGCCAGC AGGTGATGCT TGCGCAAGGC
GGTGCCGGCG GCCTCGGCAA CCTGCATTTC AAGTCGAGCA CGAACCGTGC GCCGCGCCAG
AAGACCGACG GCAAGCCGGG CGAACGGCGC ATGCTGCGGC TCGAGCTGAA GGTGCTCGCC
GACGTCGGGC TGCTCGGCAT GCCGAACGCA GGCAAGTCGA CCTTCATCTC GTCGGTGTCG
AACGCGAAGC CGAAGATCGC CGACTATCCG TTTACGACGC TCGCGCCGAA CCTCGGCGTC
GTGCGGGTCG GCCCGAGCAA GAGTTTTGTG ATCGCCGACA TCCCGGGGCT GATCGAGGGC
GCCGCCGAAG GCGCGGGCCT CGGCCACCAG TTCCTGCGAC ATCTGCAGCG CACGGGCGTG
CTGCTGCATC TCGTCGATCT GGCCCCGTTC GACGAAAACG TCGACCCGGT CGCGGAAGCG
AGGGCAATCG TCGGCGAACT GCGCAAGTAC GACGAGGCGC TCTACGAGAA GCCGCGCTGG
CTCGTCCTCA ACAAGCTCGA CATGGTGCCG GAAGACGAGC GTGAAGCGCG CGTCGCCGAT
TTCCTCGCCC GCTTCGAGTG GGACGGCCCG GTATTCGAGA TTTCGGCGCT GACGGGCCAG
GGCTGCGAAG CGCTGTGCTA CGCGATCTAC GATTACCTCG CCGAGCATTC GGACGCGCAT
CGCGCGGCGG AAGAGGAAGA TCTGGCCACG GACGTGCGGT TCCGCGACGC GCCGCCCGCC
GATGGCGGGG CGACGCCCGG CGACGACGCC TGA
|
|---|
| Protein sequence | MKFIDEARIE VIAGDGGDGS ASMRREKFVP FGGPDGGDGG RGGNVYAIAD RNINTLIDYR
YAKKHLARNG ENGRGSDCYG KGGDDVTLRM PVGTVVTDMD TGELIADLTE HGQQVMLAQG
GAGGLGNLHF KSSTNRAPRQ KTDGKPGERR MLRLELKVLA DVGLLGMPNA GKSTFISSVS
NAKPKIADYP FTTLAPNLGV VRVGPSKSFV IADIPGLIEG AAEGAGLGHQ FLRHLQRTGV
LLHLVDLAPF DENVDPVAEA RAIVGELRKY DEALYEKPRW LVLNKLDMVP EDEREARVAD
FLARFEWDGP VFEISALTGQ GCEALCYAIY DYLAEHSDAH RAAEEEDLAT DVRFRDAPPA
DGGATPGDDA
|
|---|
| |