Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bamb_0483 |
Symbol | |
ID | 4308622 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria AMMD |
Kingdom | Bacteria |
Replicon accession | NC_008390 |
Strand | - |
Start bp | 547545 |
End bp | 548540 |
Gene Length | 996 bp |
Protein Length | 331 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 638148277 |
Product | trans-hexaprenyltranstransferase |
Protein accession | YP_772376 |
Protein GI | 115350537 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0142] Geranylgeranyl pyrophosphate synthase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.000000223454 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGTCGTCGT CCACCGCCTC CCCCACCCTC AGCGCCGCCC ACCTGCTCGC CCCGATCACA AGCGACATGG AGCAGGTGAA TCGCGTTATC CGGCAAAGCC TCGCGTCCGA CGTGCTGCTG ATCAACCAGA TCGCCGAGTA CATCATCGGC GCGGGCGGCA AGCGGCTGCG TCCGGCCCTG CTGTTGCTCG TCGCCGGCGC GCTCGGCGAG ACGTCGCACC AGCGGCACGT GCTGGCCGCC GTCGTCGAGT TCATCCACAC GGCCACGCTG CTGCATGACG ACGTCGTCGA CGAATCCGAG CTGCGGCGCG GCCGCCAGAC GGCCAATGCG CTGTTCGGCA ACGCGGCGAG CGTGCTGGTG GGCGACTACC TGTATTCGCG CTCGTTCGAG ATGATGGTCG GCGTCGGCAA GATGCGCGTG ATGGAAATCC TGTCGGAAGC GACGACGATC ATTTCCGAAG GCGAAGTGCT GCAGTTGCTG AACATGCACG ACGCGGACGT CGACGAGACG CGCTACATGC AGGTGATCCG CTACAAGACG GCGAAGCTGT TCGAAGCATC GGCCCGCCTC GGCGCGGTGC TCGCGGGCGC CGATGCGCCG ACCGAAGCCG CCGCGGCCGA ATATGGCCGC CGGATCGGCA CCGCGTTCCA GATCATGGAC GACTGGCTCG ACTACGCGGG CACGGCCGAA GCGATGGGCA AGAATGCCGG CGACGACCTG CGCGAAGGCA AGCCGACGCT GCCGCTCATC TATCTGATCG AACGCGGCAC GCCCGAACAG TCGGCGCTCG CCCGCGAGGC GATCGAACAA GGCGGCACCG ATCGCTTCGA CACGATTTTC GACGCGATCA CGCGTTCGGG CGCGCTCGAC CACACGCTCG AATGCGCGCG CCAGGAAGCA CAGGCCGCCG CTGCCGCGAT CACTGCGTTC CCGGATTCGA TCTACAAGGA AAGCCTGCTC GCGTTGTGCT CGTACTCGAC GTCGCGGCAG TCGTAA
|
Protein sequence | MSSSTASPTL SAAHLLAPIT SDMEQVNRVI RQSLASDVLL INQIAEYIIG AGGKRLRPAL LLLVAGALGE TSHQRHVLAA VVEFIHTATL LHDDVVDESE LRRGRQTANA LFGNAASVLV GDYLYSRSFE MMVGVGKMRV MEILSEATTI ISEGEVLQLL NMHDADVDET RYMQVIRYKT AKLFEASARL GAVLAGADAP TEAAAAEYGR RIGTAFQIMD DWLDYAGTAE AMGKNAGDDL REGKPTLPLI YLIERGTPEQ SALAREAIEQ GGTDRFDTIF DAITRSGALD HTLECARQEA QAAAAAITAF PDSIYKESLL ALCSYSTSRQ S
|
| |