Gene Bamb_0474 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_0474 
Symbol 
ID4311163 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008390 
Strand
Start bp539184 
End bp540053 
Gene Length870 bp 
Protein Length289 aa 
Translation table11 
GC content65% 
IMG OID638148267 
Producthypothetical protein 
Protein accessionYP_772367 
Protein GI115350528 
COG category[R] General function prediction only 
COG ID[COG2607] Predicted ATPase (AAA+ superfamily) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGACAAGC TCGAACAGTT TCTGACGCGT GCCGAAGCGC TGCTCGGCCG CCTCGAGGGG 
ATGCTGCCGC CCGCACCGGC GGCGGTCGAC TGGAATGCCG CCACCGCGTT CCGCTGGCGC
AAGCGCCAGG GGCGCGGCTA TCTGCAGCCG GTGCCGGCCG CGTCGTCGAT CACGCTCGAC
GATCTGCACA ACATCGATCG GCAGAAAGGG CTGATCGAAC AGAACACGCG ACAGTTCGTG
CAGTGCAAGC CGGCGAACAA CGTGCTGCTG ACCGGTGCGC GCGGCACCGG CAAGTCGTCA
CTGATCAAGG CGTGCCTGAA CGCCTATGCG AAGGACGGGC TGCGCCTGAT CGAAGTCGAC
AAGGACGACC TGCACGATCT CGGCGACATC GTCGACCTGA TCGCGCAGCG TCCGGAGCGG
TTCATCGTGT TCTGCGACGA TCTGTCGTTC GAGGAAGGCG AATCGGGCTA CAAGGCGCTG
AAGGTCGCGC TCGACGGCTC GATCGCCGCG CAGTCCGACA ACGTGCTGAT CTACGCGACG
TCGAACCGCC GCCATCTGCT GCCCGAGTAC ATGAGCGACA ACGAGTCGTA CAAGCATCTG
CCGGACGGCG AGATCCATCC CGGTGAAGTG GTCGAGGAAA AGATTTCGCT GTCGGAGCGC
TTCGGCCTGT GGGTCAGCTT CTACCCGTTC AAGCAGGACG ACTATCTCGA CATCGTCGCG
CACTGGCTGC GCCATTTCGG CTGCGCGGAC GGCGAGATCG AGACGGCGCG CGGCGACGCG
CTCGTGTGGG CGCTCGAGCG CGGTTCGCGC TCGGGACGCG TCGCCTGGCA GTTCGCGCGC
GATTGGTCGG GTCGCAAGGA GCAGGCATGA
 
Protein sequence
MDKLEQFLTR AEALLGRLEG MLPPAPAAVD WNAATAFRWR KRQGRGYLQP VPAASSITLD 
DLHNIDRQKG LIEQNTRQFV QCKPANNVLL TGARGTGKSS LIKACLNAYA KDGLRLIEVD
KDDLHDLGDI VDLIAQRPER FIVFCDDLSF EEGESGYKAL KVALDGSIAA QSDNVLIYAT
SNRRHLLPEY MSDNESYKHL PDGEIHPGEV VEEKISLSER FGLWVSFYPF KQDDYLDIVA
HWLRHFGCAD GEIETARGDA LVWALERGSR SGRVAWQFAR DWSGRKEQA