| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_0472 |
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| Symbol | |
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| ID | 4311161 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008390 |
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| Strand | + |
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| Start bp | 534985 |
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| End bp | 537780 |
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| Gene Length | 2796 bp |
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| Protein Length | 931 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 638148265 |
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| Product | preprotein translocase subunit SecA |
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| Protein accession | YP_772365 |
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| Protein GI | 115350526 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0653] Preprotein translocase subunit SecA (ATPase, RNA helicase) |
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| TIGRFAM ID | [TIGR00963] preprotein translocase, SecA subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.611662 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACAACCG GTTTTCTCCA GAAAATTTTT GGCAGCCGCA ACCAGCGGCT CGTCAAGCAA
TATCAAAAGA CCGTCGAGAC GATCAATGCG CTCGAAACGC AGATCGAGCA GCTGACGGAC
GACCAGTTGC GCGGCAAGAC GGACGAGTTC CGCCAGCGGG TCGCGGCCGG GGAGTCGCTC
GACAAGCTGC TGCCCGAGGC GTTCGCGGTC TGCCGGGAGG CGAGCCGCCG CGTGCTGAAG
ATGCGCCACT TCGACGTGCA GCTGATCGGC GGCATGGTGC TCCACTACGG CAAGATCGCG
GAAATGCGCA CCGGCGAGGG CAAGACGCTC GTCGCGACGC TGCCCGTGTA CCTGAATGCG
CTGGCCGGCC GCGGCGTGCA CGTCGTGACG GTCAACGACT ACCTCGCCCA GCGCGACGCC
GAATGGATGG CGCGTCTCTA CAACTTCCTC GGTCTGTCGG TCGGCATCAA CCTGTCCGGC
ATGGAGCACG AGCAGAAGCA GCAGGCCTAC GCGTCGGACA TCACCTACGG TACGAACAAC
GAGTTCGGCT TTGACTACCT GCGCGACAAC ATGGTCTACG AGACCGAAGC GCGCGTGCAG
CGGGCACTGA ACTTCGCGGT CGTCGACGAA GTGGACTCGA TCCTGATCGA CGAGGCGCGT
ACGCCGCTGA TCATCTCGGG CCAGGCCGAA GATCACACCG AACTGTACGT GCGGATGAAC
GCGCTGCCGC CGCTGCTCGA GCGCCAGATC GGCGAGGAGA AGGCGGACGG CACGGGCGTC
GAGAAGCCGG GCGACTACAC GCTGGACGAA AAATCGCGCC AGGTGTTCCT GACGGAGTCG
GGCCACGAGA AGGCCGAGCG ACTGCTCGCC GAGTGGGGCC TGATCGGCGA GGGCGAGAGC
CTGTACGCGC CGCAGAACAT CACGCTGATG CACCATGTGT ATGCCGCGCT GCGCGCGCAC
ACGCTGTTCT ACAAGGACCA GCACTACGTC GTGCAGAACG GCGAAGTGGT GATCGTCGAC
GAATTCACGG GCCGCCTGAT GGCGGGCCGC CGCTGGTCCG ACGGCCTGCA CCAGGCGGTC
GAGGCGAAGG AACACGTGAA GATCCAGAGC GAGAACCAGA CGCTCGCCTC GATCACGTTC
CAGAACTACT TCCGGATGTA CGCGAAGCTC GCGGGCATGA CGGGTACGGC GGACACCGAA
GCGTACGAAT TCAACGAGAT CTACGGCCTC GAGACGGTCG TGATCCCGAC CAACCGCCCG
CCGAAGCGGA TCGACAAGCA GGACCAGATC TACAAGACCG CCAAGGAGCG CTACGACGCG
GTGATCCGCG ACATTCGCGA GTGCTACGAG CGCGGTCAGC CGGTGCTGGT CGGCACGACG
TCGATCGAGA ACTCGGAACT GCTGTCGCAC CTGCTGAAGC AGGCCGGGCT GCCGCACGAA
GTGCTGAACG CGAAGCAGCA CGAGCGTGAA GCCGCGATTG TCGCGGAAGC CGGCCGTCCG
AAACGCATCA CGATCGCGAC CAACATGGCC GGCCGCGGTA CCGACATCGT GCTCGGCGGC
AACGCGGAGA AGCAGGCGGC GTTCATCGAA GCCGACGAAG CGATCCCGGC CGACGAAAAG
GCGCGCCGCA TCAAGCAGCT GCACGACGAG TGGGAGACGC TGCACGAGCA GGTGAAGGCC
GCGGGCGGCC TGCACATCAT CGGCACCGAG CGCCACGAAT CGCGCCGGAT CGACAACCAG
CTGCGCGGCC GTGCGGGCCG CCAGGGCGAC CCGGGTTCGT CGCGCTTCTA TCTGTCGCTG
GACGATCCGC TGCTGCGCAT CTTCGCGGGC GACCGCGTGC GTTCGATCAT GGATCGCCTG
AAGATGCCCG AAGGCGAGGC GATCGAGGCC GGCATCGTCA CGCGTTCGAT CGAATCCGCG
CAGCGCAAGG TCGAGGCACG CAACTTCGAC ATCCGCAAGC AGCTGCTCGA ATACGACGAC
GTGTCGAACG ACCAGCGCAA GGTGATCTAC CAGCAGCGCA ACGAACTGCT CGAAGCCCAC
GACATCACCG AGACGATCTC GGCGATGCGT CACGGCGTGA TCACCGAAGT CGTCCGCCAG
TTCGTGCCTG AAGGCAGCAT CGAGGAACAG TGGGACGTGC CCGAGCTCGA GGAAGCGCTG
CGCAACGACT GGCAGCTCGA CCTCGCGATC CAGGAAATGG TGAACGAGTC GTCGTCGATC
ACGGCCGACG AGATTCTCGA CGCCGTGACG ACCGCCGCCG ACGAGCAGTA CGAGGCGAAG
GTCGCGATGG TCGGCCGCGA ATCGTTCAGT GCGTTCGAGC GTTCGGTGAT GCTGCAGACG
GTCGACCGCC TCTGGCGCGA GCACCTCGCG GCACTCGACC ACCTGCGTCA GGGCATCCAC
CTGCGCGGCT ATGCGCAGAA GAACCCGAAG CAGGAATACA AGCGCGAAGC GTTCGAGCTG
TTCGCCGCGA TGCTCGATGC GATCAAGCAG GAAGTCACGC GCATCGTGAT GAACGTGCAG
ATCCAGTCGC CCGAGCAGCT CGAGGAAGCC GCCGAGCAGA TCGAGGAGCG CACCGGTCAT
CTCGAGAACG TCGAGTATCA GCACGCCGAC TACGCGGAAT CCGGCGCGCC GGTGGCGAAC
GTCGCGGCCG CCACGGCGGC CACCGCGACG GCTGACATGG TCGGCAGCGC GATGACCCAC
GGCCACGCCG GCGAGCTGCC GAAGGTCGGT CGCAACGACC CGTGCCCGTG CGGCAGCGGC
AAGAAGTACA AGCAATGTCA CGGGAAGCTG TCATGA
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| Protein sequence | MTTGFLQKIF GSRNQRLVKQ YQKTVETINA LETQIEQLTD DQLRGKTDEF RQRVAAGESL
DKLLPEAFAV CREASRRVLK MRHFDVQLIG GMVLHYGKIA EMRTGEGKTL VATLPVYLNA
LAGRGVHVVT VNDYLAQRDA EWMARLYNFL GLSVGINLSG MEHEQKQQAY ASDITYGTNN
EFGFDYLRDN MVYETEARVQ RALNFAVVDE VDSILIDEAR TPLIISGQAE DHTELYVRMN
ALPPLLERQI GEEKADGTGV EKPGDYTLDE KSRQVFLTES GHEKAERLLA EWGLIGEGES
LYAPQNITLM HHVYAALRAH TLFYKDQHYV VQNGEVVIVD EFTGRLMAGR RWSDGLHQAV
EAKEHVKIQS ENQTLASITF QNYFRMYAKL AGMTGTADTE AYEFNEIYGL ETVVIPTNRP
PKRIDKQDQI YKTAKERYDA VIRDIRECYE RGQPVLVGTT SIENSELLSH LLKQAGLPHE
VLNAKQHERE AAIVAEAGRP KRITIATNMA GRGTDIVLGG NAEKQAAFIE ADEAIPADEK
ARRIKQLHDE WETLHEQVKA AGGLHIIGTE RHESRRIDNQ LRGRAGRQGD PGSSRFYLSL
DDPLLRIFAG DRVRSIMDRL KMPEGEAIEA GIVTRSIESA QRKVEARNFD IRKQLLEYDD
VSNDQRKVIY QQRNELLEAH DITETISAMR HGVITEVVRQ FVPEGSIEEQ WDVPELEEAL
RNDWQLDLAI QEMVNESSSI TADEILDAVT TAADEQYEAK VAMVGRESFS AFERSVMLQT
VDRLWREHLA ALDHLRQGIH LRGYAQKNPK QEYKREAFEL FAAMLDAIKQ EVTRIVMNVQ
IQSPEQLEEA AEQIEERTGH LENVEYQHAD YAESGAPVAN VAAATAATAT ADMVGSAMTH
GHAGELPKVG RNDPCPCGSG KKYKQCHGKL S
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