| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_0469 |
|---|
| Symbol | |
|---|
| ID | 4311158 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria AMMD |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008390 |
|---|
| Strand | + |
|---|
| Start bp | 532495 |
|---|
| End bp | 533001 |
|---|
| Gene Length | 507 bp |
|---|
| Protein Length | 168 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 638148262 |
|---|
| Product | redoxin domain-containing protein |
|---|
| Protein accession | YP_772362 |
|---|
| Protein GI | 115350523 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0678] Peroxiredoxin |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.0173332 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATTCAAG TGGGCGACGC GCTGCCCGAC GCGCAATTGT TCGAGTTCAT CGACGACGCG
CGCGCAGGCT GCACGCTGGG GCCGAACGCC TTCAGCGTGC GCGATCAGGT GGCGGGAAAG
CGGGTGGTGA TCTTCGGATT GCCCGGTGCT TTCACGCCGA CCTGTTCGGC GCAGCATGTG
CCGGGCTATG TCGAGCACGC CGAGCAACTG CGCTCGGCGG GCATCGACGA GCTCTGGTGC
GTGTCCGTCA ACGACGCATT CGTGATGGGC GCATGGGGAC GTGATCTGCA CACCGCGGGC
AAGGTGCGCA TGATGGCGGA CGGCAGCGCT GCTTTCACTC ATGCGCTGGG GCTGACGCAG
GATTTGTCCG CGCGTGGCAT GGGAATCCGT TCCCTGCGCT ACGCGATGGT GGTCGACGAC
GGTGTGGTCA AGACGCTGGC CGTCGAAGCG CCGGGCAAGT TCGAAGTGAG CGATGCGGCG
AGTGTTCTCG CGACGTTGAC GTCCTGA
|
|---|
| Protein sequence | MIQVGDALPD AQLFEFIDDA RAGCTLGPNA FSVRDQVAGK RVVIFGLPGA FTPTCSAQHV
PGYVEHAEQL RSAGIDELWC VSVNDAFVMG AWGRDLHTAG KVRMMADGSA AFTHALGLTQ
DLSARGMGIR SLRYAMVVDD GVVKTLAVEA PGKFEVSDAA SVLATLTS
|
|---|
| |