Gene Bamb_0460 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_0460 
SymbolmraY 
ID4311149 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008390 
Strand
Start bp521330 
End bp522499 
Gene Length1170 bp 
Protein Length389 aa 
Translation table11 
GC content63% 
IMG OID638148253 
Productphospho-N-acetylmuramoyl-pentapeptide- transferase 
Protein accessionYP_772353 
Protein GI115350514 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0472] UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase 
TIGRFAM ID[TIGR00445] phospho-N-acetylmuramoyl-pentapeptide-transferase 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.495048 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTGCTGG CGCTGGCGCA ATGGCTGCAG GGCGACGCAA GCTTTTTGCG CTTGTTCACG 
TACCTGACGT TCCGTGCGGT GATGGCTACC ATCACCGCGC TCGGGATCGG GCTCGTGTGC
GGACCGTGGG TGATCCGCAA GCTGACGCAA ATGAAGGTGG GGCAGGCCGT GCGCAAGGAC
GGCCCGCAGA GCCACCTCGT GAAGTCCGGC ACGCCGACGA TGGGCGGCGT GCTGATCCTG
ATTGGCATCG CGGTCGCGAC GCTGCTGTGG GGCGACCTGA CCAACCGTTT CATCTGGATC
GTGATGCTCG TCACGTTCGG TTTCGGCGTG ATCGGCTGGG TCGATGACTA TCGCAAGGTC
GTCTACAAGG ATCCGCGCGG GATGTCGTCG CGCGAAAAGT ATTTCTGGCA ATCGGTGATC
GGGCTGTTCG CGGCGGTCTA CCTGGCATTC AGCGTGTCCG AGGCGAACAA CGTGCGCGTG
TTCGACCTGT TCATGGCGTG GGTGCGCAGC GGCCTGTCGA TGGGGCTGCC CGCGCGTGCC
GACCTGATGC TGCCGTTCTT GAAATCGATC AGCTACCCGC TGGGCGTGTG GGGCTTCATC
GTGCTGACCT ACTTCGTGAT CGTCGGCGCG AGCAACGCGG TGAACCTCAC TGACGGCCTC
GACGGCCTCG TGATCATGCC GGTCGTGCTG GTCGGTGGGT CGCTCGGCGT GTTCGCGTAT
GTGATGGGGA GTTCGGTCTA TTCGAAATAC CTGTTGTTCC CGCACATTCC GGGCGCGGGC
GAACTGCTGA TCTTCTGTTC GGCGATGGGG GGGGCAGGGC TCGCGTTCCT CTGGTACAAC
ACGCACCCCG CGCAGGTGTT CATGGGCGAC GTCGGCGCGC TGGCGCTCGG CGGCGCGCTC
GGCACGGTCG CGGTGATCGT GCGCCAGGAA ATCGTGCTGT TCATCATGGG TGGCATCTTC
GTCGCGGAAA CCTTGTCGGT GATGCTGCAG GTGTCGTGGT TCAAGTACAC GAAGAAGCGT
TACGGCGAAG GGCGGCGCCT GCTGAAGATG GCGCCGCTGC ATCACCATTT CGAATTGTCC
GGCTGGAAGG AAACGCAGGT GGTGGTGCGT TTCTGGATCA TCACGCTGAT GCTGTGCCTG
TTCGGTCTGT CCACCCTCAA GTTGCGGTAA
 
Protein sequence
MLLALAQWLQ GDASFLRLFT YLTFRAVMAT ITALGIGLVC GPWVIRKLTQ MKVGQAVRKD 
GPQSHLVKSG TPTMGGVLIL IGIAVATLLW GDLTNRFIWI VMLVTFGFGV IGWVDDYRKV
VYKDPRGMSS REKYFWQSVI GLFAAVYLAF SVSEANNVRV FDLFMAWVRS GLSMGLPARA
DLMLPFLKSI SYPLGVWGFI VLTYFVIVGA SNAVNLTDGL DGLVIMPVVL VGGSLGVFAY
VMGSSVYSKY LLFPHIPGAG ELLIFCSAMG GAGLAFLWYN THPAQVFMGD VGALALGGAL
GTVAVIVRQE IVLFIMGGIF VAETLSVMLQ VSWFKYTKKR YGEGRRLLKM APLHHHFELS
GWKETQVVVR FWIITLMLCL FGLSTLKLR