| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_0459 |
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| Symbol | |
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| ID | 4311663 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008390 |
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| Strand | + |
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| Start bp | 519907 |
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| End bp | 521313 |
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| Gene Length | 1407 bp |
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| Protein Length | 468 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 638148252 |
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| Product | UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate--D-alanyl-D-alanyl ligase |
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| Protein accession | YP_772352 |
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| Protein GI | 115350513 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0770] UDP-N-acetylmuramyl pentapeptide synthase |
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| TIGRFAM ID | [TIGR01143] UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACGATGC TCAGTCTCGG CGAAGCCGCC CGCCTGATTC CTGGCGCCAC CGTCCACGGC
GATCCGGACA CGACGTTCGA GCGCGTGTCG ACGGACAGCC GCACGGTCGG CCCGGGCGAC
TTGTTCGTCG CGCTGAAGGG CGACCGCTTC GACGCGCACG ACTTCCTCGG CGACGTGGCC
GCGCGTGGCG CAGCCGCGGC GCTCGTCGCG CACGTGCCGG CGGGTCTCGC GATGCCGGTC
GTCGAGGGCG GTGAAACGCG TGCCGCGCTC GGCGCGCTCG CGCACGGCTG GCGCAAGCGC
TTCGCGGTGC CGCTCGTCGC GGTGACGGGC AGTAACGGCA AGACGACCGT CAAGGAAATG
ATCGCGTCGA TCTTCGCGGC GGCAGTCGGC GCCGACGCGC GACTGGCGAC GGCCGGCAAC
CTGAACAACG ACATCGGCGT GCCGCTGACG CTGCTGCGCC TGTCCGGCGC GCATCGCGTC
GCGGTGATCG AACTCGGGAT GAACCATCCG GGCGAGACGG AAATCCTCGC GCGCCTCGCG
GCACCGACCG TCGCGCTCGT CAACAACGCG CAGCGCGAGC ACCAGGAATT CATGGCCACC
GTCGAAGCCG TTGCGCTCGA GCACGCGGCC GTGATCCACG CGCTGACGCC GGACGGCGTC
GCGGTGTTCC CGGCCGACGA TGCGTACGCG AGCATCTGGC GCGTCGCGGC GACCGGCAAC
CCGATCCTCG ATTTCGCGCT GCACGATGGC GAACGGCAGG TCGAAGCGCA GGTCACGGGC
CGTCTGCACG GCGGCGAGCT TGCGATCGAC ACGCCGTCGG GCGCGGTAAC GGTGCGGCTG
CGCGCGCTCG GCGAGCACAA CGCACGCAAC GCATTGGCTG CTGCTGCTGC TGCGCTCGCG
GCCGGTATCG AACTGGCCGC GATCAAGCAG GGCCTCGAAT CGTTCGAGCC GGTCAAGGGG
CGTCTGCAGG TCCGCCAGGC GGACGTCGGC AGCCTCGCGG GCGCGACGGT CGTCGATGAC
ACCTACAACG CGAACCCCGA CTCGATGCGC GCGGCGATCG ACGTGCTGGC CGCGCAACCG
GCGCCGCGCG TGTTGGTGAT CGGCGACATG GGCGAGGTCG GCGACGAAGG CCCGGCATTC
CACCGCGAGA TCGGCGCGTA TGCGCGCGAG CGCGGCATCG ATGCGCTGTT CGCGCTCGGC
GACGCGTCGC GCGATGCGTG CACGGCGTAC GGCGACACGG CCCGCCATTT CGGCGACGTC
GGCGCGCTGT TGACTGCGCT GCTCGCGGCG GGCTACGGCG CGCAGGCCAC GGTGCTCGTG
AAGGGCTCGC GGTACATGAA GATGGAGCGC GTGGTCGACG CGCTGACGAA CCAATCCGCG
GCGGGCACGG TGCCCGCCGC ACACTGA
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| Protein sequence | MTMLSLGEAA RLIPGATVHG DPDTTFERVS TDSRTVGPGD LFVALKGDRF DAHDFLGDVA
ARGAAAALVA HVPAGLAMPV VEGGETRAAL GALAHGWRKR FAVPLVAVTG SNGKTTVKEM
IASIFAAAVG ADARLATAGN LNNDIGVPLT LLRLSGAHRV AVIELGMNHP GETEILARLA
APTVALVNNA QREHQEFMAT VEAVALEHAA VIHALTPDGV AVFPADDAYA SIWRVAATGN
PILDFALHDG ERQVEAQVTG RLHGGELAID TPSGAVTVRL RALGEHNARN ALAAAAAALA
AGIELAAIKQ GLESFEPVKG RLQVRQADVG SLAGATVVDD TYNANPDSMR AAIDVLAAQP
APRVLVIGDM GEVGDEGPAF HREIGAYARE RGIDALFALG DASRDACTAY GDTARHFGDV
GALLTALLAA GYGAQATVLV KGSRYMKMER VVDALTNQSA AGTVPAAH
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