Gene Bamb_0432 details

Gene Information

• Locus tag: Bamb_0432
• ID: 4309795
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Burkholderia ambifaria AMMD
• Kingdom: Bacteria
• Replicon accession: NC_008390
• Strand: +
• Start bp: 483374
• End bp: 485242
• Gene Length: 1869 bp
• Protein Length: 622 aa
• Translation table: 11
• GC content: 68%
• IMG OID: 638148220
• Product: peptidase M61 domain-containing protein
• Protein accession: YP_772325
• Protein GI: 115350486
• COG category: [R] General function prediction only
• COG ID: [COG3975] Predicted protease with the C-terminal PDZ domain

Plasmid Coverage information

• Num covering plasmid clones: 15
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGGTATCTG CCGGCGCCTC TCTTCGTTTC CGCCGCCATA TTCCGTCCGA TTTCCGACCG 
ATTGCCACGA TGACCCAGCC GATCCGTTAT TCGATTGCCC CGAAAGATCT TGCCGCGCAC 
CTGTTCGAAG TGTCGGTGAC GGTCACCGAT CCCGATCCCG AAGGCCAGCG CTTCTCGCTG 
CCGGTATGGA TTCCCGGCAG CTACCTCGTG CGCGAATTCG CGCGCAACAT CGTGACGCTC 
GCCGCGTTCA ACGACGCGGG CCGCAAGGTG CGGATCGCAA AAACCGACAA GAACACGTGG 
CAGGCCGCGC CGGTGAACGG CACGCTGACG CTGCGCTACG ACGTGTACGC GTGGGATCTG 
TCGGTCCGCT CCGCGTATCT CGACGAATCG GGCGGCTTCT TCAACGCCAC GGCCGTGTTC 
CTGAGCGTCG CCGGTCGCGA GGATGCACCG TGCGAAGTCG ACATCGCGAA ACCGGCGGGC 
GCGGCGTTCC GCACGTGGCG CGTCGGCACG TCGCTGCCCG AGGCGCGCGG CACCAGGCGT 
TACGGGTTCG GCGCATATCG GGCCGCGAAC TATGACGAAC TCACCGACCA TCCGGTGACG 
ATCGGCGAAT TCGCGCTCGC GACGTTCGAC GCGCACGGCG TGCCGCACGA CATCGTGATC 
GCCGGGCGCG TGACGCAGCT CGACATGGAG CGGCTGCGCG CCGACCTGAA GCGCGTGTGC 
GAAGCGCAGA TCGCGCTGTT CGAGCCGAAA TCGAAGAAGG CGCCGATGGA CCGCTACGTG 
TTCATGACGC TCGCGGTCAG CGACGGCTAC GGCGGCCTCG AGCACCGTGC GTCGACCGCG 
CTGATCTGCA ACCGCACCGA TCTGCCGGTG AAGGGCCGGT CGGAAACGAC GGAAGGCTAT 
CGCACCTATC TCGGCCTGTG CAGCCACGAG TATTTCCACA CGTGGAACGT GAAGCGCATC 
AAGCCGGCCG CGTTCGTGCC GTACGACCTC GCGCGGGAGA ACTACACGTC GCTGCTGTGG 
CTGTTCGAGG GCTTCACGTC GTATTACGAC GACCTGATGC TCGTGCGCAG CGGGCTGATG 
TCGCAGGACG ACTATTTCGC GGCGCTCGGC CGTACCGTCG GCGGCGTGCT GCGCGGCACG 
GGGCGCCTGA AGCAAAGCGT CGCGGACAGC TCGTTCGACG CGTGGATCAA GTATTACCGC 
CAGGACGAGA ACGCGACCAA CGCGATCGTC AGCTATTACA CGAAGGGTTC GCTCGTCGCG 
CTCGCGTTCG ATCTCGCGAT CCGCGCACAG ACGCGCGACC GCAAGTCGCT GGACGACGTG 
ATGCGTCTGC TGTGGCAGCG CTACGGCCGT GAGTTCTATC GTGGCAAGCA GGCGGGCGTC 
GAGGAAAACG AGGTCGAGGC GCTGATCGAG GAAGCGACGG GCGTGGCCCT CGGCCGACTG 
TTCGCCGACG CCGTGCACGG CACGCGCGAC CTGCCGCTCG CCGAACTGCT CGCGCCGTTC 
GGCGTGACGC TCGCGCCCGA GGTCGCGGCT GGCGCGGCCG CGAAACCGAC GATCGGCGCG 
CGCCTGCGCG GCGGCGCGGA CTGCACGCTG GCGGCGGTGT ACGAGGGCGG CGGCGCGCAT 
CGCGCGGGGC TGTCGGCCGG CGACACGCTG ATCGCGCTCG ACGGGCTGCG CGTCACCGGC 
ACGAATCTCG ACACGCTGCT CGCGCGCTAC CGGCCGGGCG ACAAGGTCGA GGTGCACGCA 
TTCCGCCGCG ACGAGCTGCG GACCGCGAAG CTGAAGCTGG ACGGGCCTGA GATCATGCGC 
TACCGGCTTA CAGCGGACGC GAAACCGGCC GCCGCACGCA AGTCCCGGGA AATCTGGCTC 
AAGGGCTGA 

 

Protein sequence

MVSAGASLRF RRHIPSDFRP IATMTQPIRY SIAPKDLAAH LFEVSVTVTD PDPEGQRFSL 
PVWIPGSYLV REFARNIVTL AAFNDAGRKV RIAKTDKNTW QAAPVNGTLT LRYDVYAWDL 
SVRSAYLDES GGFFNATAVF LSVAGREDAP CEVDIAKPAG AAFRTWRVGT SLPEARGTRR 
YGFGAYRAAN YDELTDHPVT IGEFALATFD AHGVPHDIVI AGRVTQLDME RLRADLKRVC 
EAQIALFEPK SKKAPMDRYV FMTLAVSDGY GGLEHRASTA LICNRTDLPV KGRSETTEGY 
RTYLGLCSHE YFHTWNVKRI KPAAFVPYDL ARENYTSLLW LFEGFTSYYD DLMLVRSGLM 
SQDDYFAALG RTVGGVLRGT GRLKQSVADS SFDAWIKYYR QDENATNAIV SYYTKGSLVA 
LAFDLAIRAQ TRDRKSLDDV MRLLWQRYGR EFYRGKQAGV EENEVEALIE EATGVALGRL 
FADAVHGTRD LPLAELLAPF GVTLAPEVAA GAAAKPTIGA RLRGGADCTL AAVYEGGGAH 
RAGLSAGDTL IALDGLRVTG TNLDTLLARY RPGDKVEVHA FRRDELRTAK LKLDGPEIMR 
YRLTADAKPA AARKSREIWL KG