Gene Bamb_0418 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_0418 
Symbol 
ID4311411 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008390 
Strand
Start bp467415 
End bp469229 
Gene Length1815 bp 
Protein Length604 aa 
Translation table11 
GC content71% 
IMG OID638148206 
Productpeptidase M24 
Protein accessionYP_772311 
Protein GI115350472 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0006] Xaa-Pro aminopeptidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATGCCC GTCTCCCCGA AGTCTCGCCG GTGCCGGCCC GCCTCGCGCT GCTGCGCGGC 
GCGATGGTCC GCGAGGATCT GGCCGCCTAT CTCGTGCCGT CCGCCGATCC GCACCTGTCC
GAGTACCTGC CCGAGCGCTG GCAGGCGCGC CGCTGGCTGT CCGGTTTCAC GGGCTCGGTC
GGCACGCTGG TCGTGACCGC CGATTTCGCG GGCTTGTGGG TCGACAGCCG TTACTGGGTG
CAGGCCGAGG CCGAACTCGC CGGCACGGGC GTCCAGCTGA TGAAGATGAC GGGCGGCCAG
CAGAGCGCAC CCCACGTCGA CTGGCTCGCG CAGAACGTGC CGGCCGGTGC GACGGTCGGC
GTCGACGGCG CCGTGCTCGG CGTCACGGCG GCACGCGCGC TGACGGCCGC GCTGAGCGCG
CGCGGCATCG CGCTGCGCAC CGACCTCGAC CTGCTCGACG CGATCTGGCC GGAGCGCCCG
GGGCTGCCGG GTGACGCGGT GTTCGAGCAT CTCGCGCCGC AGGCCGACAC GACGCGCGCG
AGCAAGCTCG CCGAAGTGCG CCGCGCGATG CACGCGCAGG GCGCGCAATG GCATTTCGTG
TCGACGCTCG ACGATCTCGC GTGGCTGTTC AACCTGCGCG GCGCCGACGT CAACTTCAAC
CCCGTGTTCG TCGCGCACGC GCTGATCGGT GCCGATCGCG CGACGCTGTT CGTCGCCGAC
GGCAAGGTGT CGCCGGCGCT GGCCGCGTCG CTCGCGCGGG ACGGTGTCGA GGTCCGCGCA
TACGATGCAG TGCACGCGTC GCTCGCGGCG CTGCCCGACG GCGCGACGCT GCTGATCGAT
CCGCGCCGTG TGACGTTCGG CACGCTCGAG GCCGTGCCGG CCGGCGTGAA GCTGATCGAG
GCGGTGAACC CGTCGACGTT CGCGAAGTCG CGCAAGACAT CCGCCGAGAT CGAGCACGTG
CGCGTGACGA TGGAGCACGA CGGCGCCGCG CTTGCCGAAT TCTTCGCGTG GTTCGAGCAG
GCGGTGAACC GCGAGACCGT CACCGAGCTG ACGATCGACG AGAAGCTAAC GGCCGCGCGC
GCACGGCGCC CCGGCTACGT GTCGCCGAGC TTCGCCACGA TCGCCGGCTT CAACGCGAAC
GGCGCGATGC CGCACTATCG TGCAACGCCC GAGTCGCACG CGACGATCGC CGGTGACGGC
CTGCTGCTCG TCGATTCGGG CGGCCAGTAC ACGACCGGCA CCACCGACAT CACGCGCGTC
GTGCCGGTCG GCACGCTCAG CGACCTGCAG CGACGCGATT TCACGATCGT GCTGAGGTCG
ATGATGGCGC TGTCGCGCGC ACGCTTTCCG CGCGGCATCC GCTCGCCGAT GCTCGATGCG
ATCGCGCGCG CGCCGATGTG GGCGGCCGGG CTCGACTACG GCCACGGCAC CGGCCACGGC
GTCGGCTACT TCCTGAACGT GCACGAGGGC CCGCAGGTCA TCTCGCACTA CGCGCCGGCT
GAGCCGCACA CGGCGATGGA AGAAGGGATG ATCACGTCGA TCGAGCCGGG CGTGTATCGG
CCCGGCAAAT GGGGCATCCG GATCGAGAAC CTGGTCGTGA ACCGCGCGGG CGGGCAGACC
GAGTTCGGCG ACTTCCTCGC GTTCGAGACG CTCACGTTGT GCCCGATCGA CACGCGCTGC
GTGCTCGTCG AGATGCTGCA TGAAGAAGAG CGCGCGTGGC TGAACGCGTA TCACGCGACC
GTCCGCGAGC GTGTCGGCCG GCACGTGAGC GGCGACGCGA AGGCGTGGCT CGACGCGCGC
ACGCAGCCGA TCTGA
 
Protein sequence
MNARLPEVSP VPARLALLRG AMVREDLAAY LVPSADPHLS EYLPERWQAR RWLSGFTGSV 
GTLVVTADFA GLWVDSRYWV QAEAELAGTG VQLMKMTGGQ QSAPHVDWLA QNVPAGATVG
VDGAVLGVTA ARALTAALSA RGIALRTDLD LLDAIWPERP GLPGDAVFEH LAPQADTTRA
SKLAEVRRAM HAQGAQWHFV STLDDLAWLF NLRGADVNFN PVFVAHALIG ADRATLFVAD
GKVSPALAAS LARDGVEVRA YDAVHASLAA LPDGATLLID PRRVTFGTLE AVPAGVKLIE
AVNPSTFAKS RKTSAEIEHV RVTMEHDGAA LAEFFAWFEQ AVNRETVTEL TIDEKLTAAR
ARRPGYVSPS FATIAGFNAN GAMPHYRATP ESHATIAGDG LLLVDSGGQY TTGTTDITRV
VPVGTLSDLQ RRDFTIVLRS MMALSRARFP RGIRSPMLDA IARAPMWAAG LDYGHGTGHG
VGYFLNVHEG PQVISHYAPA EPHTAMEEGM ITSIEPGVYR PGKWGIRIEN LVVNRAGGQT
EFGDFLAFET LTLCPIDTRC VLVEMLHEEE RAWLNAYHAT VRERVGRHVS GDAKAWLDAR
TQPI