Gene Bamb_0406 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_0406 
Symbol 
ID4309787 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008390 
Strand+ 
Start bp456370 
End bp456975 
Gene Length606 bp 
Protein Length201 aa 
Translation table11 
GC content68% 
IMG OID638148194 
Productnitroreductase 
Protein accessionYP_772299 
Protein GI115350460 
COG category[C] Energy production and conversion 
COG ID[COG0778] Nitroreductase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.699033 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCTGTCA AACCTGCTCC CACCACTGTT TCGATTCACG AACTGATCGC GGGCCGCTGG 
AGCCCGCGCG CGTATTCGGA CGAGCCGATC AGCGCCGCCG ATCTGCACGC GGTGCTCGAA 
GCCGCGCGCT GGGCGCCGTC CGCATACAAC GCGCAGCCGT GGCGCTTCAT CGTCTTCGAT 
CGCACGCAGG ACGAAGCAGC GTTCAAGCGC GCATTCGCGA CACTGGTGCC GTTCAACCAG 
GCCTGGAACG CGCCGGCGCC GGTGCTGATC GCCGTGACTT CGCACACGCT CACGCCGAAG 
GGCGAGCCGG CGTCGACCGC ACTGTATGAC GCGGGCGCCG CGGCGATGTC GCTGGTGCTG 
CAGGCGCACG CGCTGGGCCT TGCCGCGCAC CAGATGAGCG GCTTCGACGC GAAGGCGTTC 
CGCGACGCGT TCGAGATTCC GGCCGACGTC GCCATTCCGG CGCTCATCTC GCTCGGCCAC 
TACGGCAACG TCGACAAGCT CGATCCGGTG CTGCGCGACC GCGAAAAGGC GCCCCGCACG 
CGTCACGCGC TCGGCGAGGT CGTCTATGCG GGCGCATGGA AGAAGGGTTT CGAAGCGGTA 
GCCTGA
 
Protein sequence
MSVKPAPTTV SIHELIAGRW SPRAYSDEPI SAADLHAVLE AARWAPSAYN AQPWRFIVFD 
RTQDEAAFKR AFATLVPFNQ AWNAPAPVLI AVTSHTLTPK GEPASTALYD AGAAAMSLVL 
QAHALGLAAH QMSGFDAKAF RDAFEIPADV AIPALISLGH YGNVDKLDPV LRDREKAPRT 
RHALGEVVYA GAWKKGFEAV A