Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bamb_0392 |
Symbol | |
ID | 4309773 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria AMMD |
Kingdom | Bacteria |
Replicon accession | NC_008390 |
Strand | - |
Start bp | 438691 |
End bp | 439680 |
Gene Length | 990 bp |
Protein Length | 329 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 638148180 |
Product | hypothetical protein |
Protein accession | YP_772285 |
Protein GI | 115350446 |
COG category | [S] Function unknown |
COG ID | [COG3913] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | [TIGR03373] type VI secretion-associated protein, BMA_A0400 family |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.441461 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACGCAAA CCGTTCAGGC GCAGATCGCC TACTTCGGCA AGATTCCGTC GCGCGGCGAC TTCGTGAAGA GCCCGCACAA TCCGCAGTTG CTGCAGACGC TCGATCGCTG GATCGCGCAG GCGCTCGAAC TGCTCGCGGA AGATCCGCGC TGGAAGATCG TCTACGAGGA TGCGAAGCCG ATGCATTTCG CGTTCCTCGG CTCGCGCAGC AAGCTCGCGA TCGCGGGCCA CATGGTCGCG AGCCACGACG TGTCGATGCG CCGCTTCCCG TTCCTCGGCG CGACCGCGCT GGAAGTCGAC CGGCCGCTCG CGTTCCTCGC GCGCAGCCCG CTCGCGTTCG CGCGGCTGTG GTCGCGCGTC GCCGCGCAGA TTCCGCCGCT GCTGGCCAAG GAGGAACCGC CCGGCGCGCT GCAGGCGCTC GGCGACACGC AGGTGCCGAT CGACGTCGGC GGCCCCGGCA CGTCGCATGA CGGCACCTTC AACGACTTCA TCGAACACCA GTCGCTGTAC GGCCTGCAGC AGATGCTGCT CGAAAGCGGC CATCCGGTCC GGCTGCGCGG CGCGATGCTC GCGCTCGGCT CGCTGTTGCG GCCCGTGATG CAGAGCGGTT CGTCGCACAT CGAGCGCGGC CTCACGCTGC CGCTGCCGGT CGATCCGTTC TATCGCAGCC TCGTCGCCGC GTTCTGGCTC GAACTGATCG CACCGTTCGT CGCGCAGGCC GACTTCGAGC TCGCGATCTT CATCGGCTCG ATCGCCGAGC GCGAGCGGTT GATCATCGGC TTCAACGGCG CGTCTTCGAA GACGCTGCTG AGCGTCGTCG ACCCGCAGAC CTACGCCGCC CACAACATCG ACATCGACGA TCCCGAGTGG ATCGACGCCC ATGCGCAAAA CGATCAGCAG ATCAGCAAGC TCGTCAGCTA CCTCGACCAA CCGCAACTCT CGCTGCGCGT CGCCATCGAC GCATTCCGCG AAGCGTTCAT CGGAGGCTGA
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Protein sequence | MTQTVQAQIA YFGKIPSRGD FVKSPHNPQL LQTLDRWIAQ ALELLAEDPR WKIVYEDAKP MHFAFLGSRS KLAIAGHMVA SHDVSMRRFP FLGATALEVD RPLAFLARSP LAFARLWSRV AAQIPPLLAK EEPPGALQAL GDTQVPIDVG GPGTSHDGTF NDFIEHQSLY GLQQMLLESG HPVRLRGAML ALGSLLRPVM QSGSSHIERG LTLPLPVDPF YRSLVAAFWL ELIAPFVAQA DFELAIFIGS IAERERLIIG FNGASSKTLL SVVDPQTYAA HNIDIDDPEW IDAHAQNDQQ ISKLVSYLDQ PQLSLRVAID AFREAFIGG
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