| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_0387 |
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| Symbol | |
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| ID | 4309733 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008390 |
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| Strand | + |
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| Start bp | 431997 |
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| End bp | 434666 |
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| Gene Length | 2670 bp |
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| Protein Length | 889 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 638148175 |
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| Product | ATPase |
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| Protein accession | YP_772280 |
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| Protein GI | 115350441 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0542] ATPases with chaperone activity, ATP-binding subunit |
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| TIGRFAM ID | [TIGR03345] type VI secretion ATPase, ClpV1 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.315602 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCACGC CTCTGAAGAC CCTGATCACG AAACTGAACC CGCTGTGCCG GCACGCGACC
GAGCGTGCGG CGAGCGCGTG CCTGGCGCGC GGCCATTACG AGGTCGATCT GGAGCACCTG
TTCCTCGCGC TGCTCGACGA GGCGACGGGC GACCTGCCGC TCGCACTGCG CGCGAGCCGC
GTCGATCCGC ATGCGCTGCG TGCCGATCTC GAGCGCGAAC TCACGCGGCT GAAGACGGGC
AACACGCGCA CGCCGGTTTT CTCCGTGCAT CTGATCGCGC TGTTCGAGCA GGCATGGCTG
ATCGCGTCGC TCGATTCGCA GCTCGGCCGC ATCCGCTCGG GGCACCTGCT GCTCGCGCTG
CTGACCGCGC CCGATCTCGC GCAGTTCGCG CAGCGCATGT CGCCGCAGTT CGCGGAAATG
AACGTGACGG ACCTGAAGCA CAAGTTCGAC GAGATCATGG GCGGCTCGAG CGAGGCCGAG
CCGCGCCAGC TGGATACGGA AGAGGGTGAC GTCGCGCCGG CCGCCAACGG CGCCTTGCCC
GCGGCCGGCC CGTCGAAGAC GCCCGCGCTC GACACGTACA CGACCAACCT CACGCAGCGT
GCGCGCGACG GCAAGATCGA TCCGGTGATC GGTCGCGAAG CCGAGATCCG CCAGGCGATC
GACATCCTGA TGCGCCGGCG CCAGAACAAC CCGATCATGA CCGGCGAGGC CGGCGTCGGC
AAAACGGCGG TCGTCGAGGG CCTCGCGTTG CGGATCGCGG CCGACGACGT GCCGCCGCCG
CTGCGTGGCG TCGCGCTGCA CGTGCTCGAC ATGGGCCTGC TGCAGGCCGG CGCGAGCGTG
AAGGGCGAGT TCGAGAACCG TCTGAAGAGC GTGATCGACG AGGTGAAGAA GAGCGCGCAC
CCGATCATCC TGTTCATCGA CGAGGCGCAC ACGATCATCG GCGCGGGCGG CCAGGCCGGC
CAGAACGACG CGGCGAACCT GCTGAAGCCG GCGCTCGCGC GTGGCGAGCT GCGCACGATC
GCCGCGACGA CGTGGAGCGA ATACAAGAAG TACTTCGAGA AGGATGCGGC GCTTGCGCGG
CGTTTCCAGG TCGTGAAGGT CGAGGAGCCG AGCGAGCCGC TCGCGGCCGC GATGCTGCGC
GGGATGTCCG GGCTGATGGA GAAGCACTTC AACGTGCGGA TCCTCGACGA TGCGATCACC
GAGGCCGTGC GCCTGTCGCA TCGCTACATC AGCGGCCGCC AGCTGCCGGA CAAGGCGATC
AGCGTGCTCG ACACCGCGTG CGCGAAGGTC GCGCTCGCGC ACAGCGCGAC GCCGGCGACG
ATCGACGACA CGAAGAAGCG CATCGAGCGC ATCGACGCGG AAATCGCGTC GCTGGAGCGC
GAATCGGCGG GCGGCGCGTC GCACGACGAG CGGCTGCTCG AACTGCGCGG CGCGCGCGAC
ACTGCGCTCG CGCAATTGGC CGAGGACGAG GCGCGCTATG AAGCCGAGCG CGTGATCGTC
GCCGAGATCA CCGAACTGCG TGATGCGCTC GACAAGGCGC GCGGCCCGTC GGAAGACGGC
GAGCCGGTCG ACGTGTCGGC CACTCGCGAG AAGCTGACGG AGCGCGTCGC GGCGCTGCAC
GCGCTGCAGG GCGGCGAGCC GATGGTGCCG CTGCAGGTCG ACGGCCATGT CGTCGCCGAG
ATCGTCGCCG CGTGGACCGG CATTCCGCTC GGCCGTATGG TGAAGGACGA GATCGACACC
GTGCTGAATC TGCAGCCGCT GCTGAGTGCG CGCGTGATCG GCCAGGACCA TGCGCTGGAC
GCGATCGCGC AGCGCGTGCG CACGGCGACC GCGAACCTCG AGGATCCGAA CAAGCCGCGC
GGCGTGTTCA TGTTCGTCGG GCCGTCGGGC GTGGGCAAGA CCGAGACGGC GCTCGCGCTG
GCCGACATCC TGTACGGCGG CGAGCGCAAG ATGGTCACGA TCAACATGAG CGAGTACCAG
GAAGCGCACA GCGTGTCGGG CCTGAAGGGT TCGCCGCCGG GCTACGTCGG CTACGGCGAA
GGCGGCGTGC TGACCGAGGC CGTGCGCCGC AACCCGTATT CCGTCGTGCT GCTCGATGAA
GTCGAGAAGG CGCACCCGGA CGTGCTCGAG ATGTTCTTCC AGGTGTTCGA CAAGGGCACG
ATGGACGACG CCGAAGGGCG CGAGATCGAC TTCCGCAACA CGCTGATCAT CCTGACGTCG
AACGTCGGGT CGGCCGCGGT GATGCAGGCG TGCCTGAACA AGCCGGCCGA GGAGCTGCCC
GATCCGGACG CGCTCGCCGA GGCGCTGCGC CCGCAGCTGT ACAAGACGTT CAAGCCCGCG
TTCCTCGGCC GGATGAAGGT CGTGCCGTAC TACCCGATTT CCGACGACGT GCTGGCCGAG
ATCATCGAGC TGAAGCTCGA ACGGATCCGC CGCCGCATCG ACGCGAACCA CAAGGCCGCG
TTCGAGTGGG ACGAATCGCT CGTCGATGCG GTGCTCGCGC GCTGCACCGA GGTCGACTCG
GGCGCCCGCA ACGTCGACCA CATCCTGAAC GGCACGTTGC TGCCGGAGAT CGCGGGCCAC
GTGCTCGGCC GGATCGCCGA CGGCGCGGCC ATCGCGCGCA TCGCGGTGCG CGCGGACGAG
GCCGGCGAAT TCGCTTACAC CGTCGAATGA
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| Protein sequence | MSTPLKTLIT KLNPLCRHAT ERAASACLAR GHYEVDLEHL FLALLDEATG DLPLALRASR
VDPHALRADL ERELTRLKTG NTRTPVFSVH LIALFEQAWL IASLDSQLGR IRSGHLLLAL
LTAPDLAQFA QRMSPQFAEM NVTDLKHKFD EIMGGSSEAE PRQLDTEEGD VAPAANGALP
AAGPSKTPAL DTYTTNLTQR ARDGKIDPVI GREAEIRQAI DILMRRRQNN PIMTGEAGVG
KTAVVEGLAL RIAADDVPPP LRGVALHVLD MGLLQAGASV KGEFENRLKS VIDEVKKSAH
PIILFIDEAH TIIGAGGQAG QNDAANLLKP ALARGELRTI AATTWSEYKK YFEKDAALAR
RFQVVKVEEP SEPLAAAMLR GMSGLMEKHF NVRILDDAIT EAVRLSHRYI SGRQLPDKAI
SVLDTACAKV ALAHSATPAT IDDTKKRIER IDAEIASLER ESAGGASHDE RLLELRGARD
TALAQLAEDE ARYEAERVIV AEITELRDAL DKARGPSEDG EPVDVSATRE KLTERVAALH
ALQGGEPMVP LQVDGHVVAE IVAAWTGIPL GRMVKDEIDT VLNLQPLLSA RVIGQDHALD
AIAQRVRTAT ANLEDPNKPR GVFMFVGPSG VGKTETALAL ADILYGGERK MVTINMSEYQ
EAHSVSGLKG SPPGYVGYGE GGVLTEAVRR NPYSVVLLDE VEKAHPDVLE MFFQVFDKGT
MDDAEGREID FRNTLIILTS NVGSAAVMQA CLNKPAEELP DPDALAEALR PQLYKTFKPA
FLGRMKVVPY YPISDDVLAE IIELKLERIR RRIDANHKAA FEWDESLVDA VLARCTEVDS
GARNVDHILN GTLLPEIAGH VLGRIADGAA IARIAVRADE AGEFAYTVE
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