| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_0378 |
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| Symbol | |
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| ID | 4309724 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008390 |
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| Strand | - |
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| Start bp | 422715 |
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| End bp | 424061 |
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| Gene Length | 1347 bp |
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| Protein Length | 448 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 638148166 |
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| Product | hypothetical protein |
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| Protein accession | YP_772271 |
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| Protein GI | 115350432 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3522] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR03353] type VI secretion protein, VC_A0114 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.493285 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTTATT CGGCCAAGGT GCTGTGGGGG GAAGGGCTGT TCCTCCGGCC TCAACACTTT
CAGCGGCAGG ACGCCTACCA CGAGGCGCGC CTGTTCGAAT CCATCCAGGC GATCCAGCCG
TACAACTGGG GCGTGCGCTC GGTGCGCATC GATCGCGATG CGCTCGGCAG CAACGTGCTG
CGCGTGGCCG AGCTCGCGCT CGTGTTCCCG GACGGCGCGC TGTATGCCGC GCCGCAGGCC
GACGACTTGC CGCCGCCGAT CGCGCTCGAC ACGCTGCCCG ACGGCATCAA CGAATTCGTG
TTCTACCTCG CGCTGCATCC GCTGCGCGAG AACGGCACCA ACTACAGCGA CGATCCGGCC
GCCGGCTTCA TGACGCGCTT CGTCAGCGAG CAGACGAGCG TCGCCGACAA CTTCACCGAC
GCCGCCGAAG CCGACATCAC GTTCCTGAAG ACGCAGGTCA AGCTGATCGC GCACAGCGAG
CCGCGCGACC AGCTGCTGTC GGTGCCGCTC GTGCGCGTGC GCCGCACCGC GACGTCCGGG
TTCGAGATCG ACGACAGCTT CGTGCCGCCG TGCCTCGCGA TCGAGGCTTC GCCGATCCTC
CACCAGCGCT TGCGCCAACT GGTCGACGCG CTGCAGGCGA AGGTCAACGC GCTGTACGGT
TTTCACCGCG AGCCGTCGAA GAACATCATC GAGTTCCGCT CGGGCGACAT CGCATCGTTC
TGGCTGCTGC ATACCGCGAA CGCCGCGTTC GCGACGCTCG CGCACTTGCA CCAGCATGCG
GCGCTGCATC CGGAACGACT GTTCCAGGAA CTGCTGCGCC TCGCGGGGCA ACTGATGACG
TTCTCGAAGG GCTATACGCT CGCCGATCTG CCCGTGTATC GCCATGACGA TCCCGGCCCG
AGCTTCGCGC GTCTCGACCT GATGCTGCGC GAGCTGCTCG ACACCGTGAT TTCGACGCGC
TACTTCGCGA TCACGCTCGA CGAGGTGCGT CCGTCGTTCC ACCTCGGCCG CCTCGATTCC
GGCAAGATCG ACGACAAGAC CGAGTTCTAC CTGGCCGTGT CCGCGGACAT GCCGAACGTC
GAGCTCATCG ATGCCGTGCC GGCCCGCTTC AAGGTCGGTG CGCCCGACGA CGTCGACAAG
CTCGTGCTGT CGGCGATGCC CGGCGTGCGG CTGTCGTACA CGCCGCAGGT GCCGCCCGCG
ATCCCCGTGC GGCCGGGCGC GTGCTATTTC TCGCTCGATT CGCGCGGCGC GTTGTACGAG
CGCATGCTGC AGGCCCAGTC CGCGATGATC TACGCGCCGA CTGGCATCAA TGACCTGAAA
TTCGAACTGA TCGCGGTCAC CTCATGA
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| Protein sequence | MSYSAKVLWG EGLFLRPQHF QRQDAYHEAR LFESIQAIQP YNWGVRSVRI DRDALGSNVL
RVAELALVFP DGALYAAPQA DDLPPPIALD TLPDGINEFV FYLALHPLRE NGTNYSDDPA
AGFMTRFVSE QTSVADNFTD AAEADITFLK TQVKLIAHSE PRDQLLSVPL VRVRRTATSG
FEIDDSFVPP CLAIEASPIL HQRLRQLVDA LQAKVNALYG FHREPSKNII EFRSGDIASF
WLLHTANAAF ATLAHLHQHA ALHPERLFQE LLRLAGQLMT FSKGYTLADL PVYRHDDPGP
SFARLDLMLR ELLDTVISTR YFAITLDEVR PSFHLGRLDS GKIDDKTEFY LAVSADMPNV
ELIDAVPARF KVGAPDDVDK LVLSAMPGVR LSYTPQVPPA IPVRPGACYF SLDSRGALYE
RMLQAQSAMI YAPTGINDLK FELIAVTS
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