| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_0358 |
|---|
| Symbol | |
|---|
| ID | 4308797 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria AMMD |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008390 |
|---|
| Strand | + |
|---|
| Start bp | 398292 |
|---|
| End bp | 399038 |
|---|
| Gene Length | 747 bp |
|---|
| Protein Length | 248 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 638148146 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_772252 |
|---|
| Protein GI | 115350413 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG0327] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | [TIGR00486] dinuclear metal center protein, YbgI/SA1388 family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.388987 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGATCGGA TCGAACTTGA ATTGTACTTG AACAATACCC TTGAAACCGC GCGCTTCAAG
GACTATTGCC CGAACGGCCT CCAGGTCGAG GGGCGCCGCA AGATCGAGAA GATCGCCACC
GGCGTGACGG CGTCGGTCGC GTTCCTCGAA GCCGCGCTCG AATGGGGGGC GGATGCGGTG
CTCGTTCATC ACGGTTATTT CTGGCGCAAC GAGGCGCCGC AGATCACGGG CCGCAAGTAT
CAGCGCCTGA AGCTGCTGCT CGCGAACGAC CTGAACCTGT TCGCGTTCCA TCTGCCGCTC
GACGCGCACC CCGAGCTCGG CAACAACGCG CAGCTCGGCC AGAAGCTCGG GCTGATCGGC
GATCAGCGTT TCGGCGACGG CGACCTCGGC TGGATGGCGA CGCTGCCGAT GCCCGTCACG
CTCGAGCACT TCGTCGCGAA GGTTGAGCGC ACGCTCGGCC GCACGCCGCT CGTGCTCGGC
GATGCGGACA TGCAACTGCG CCGCATCGCG TGGTGCACCG GCGCCGCGCA AAGTTATTTC
GATGCCGCGA TCGATGCCGG CGCCGACGTG TTCCTGACCG GCGAGGTATC GGAATCCGTC
ACGCACGCGG CCGCGGAGAG CGGCGTTGCG TTCGTTGCGG CAGGGCACCA TGCCACCGAA
CGCTACGGAA TCCAGGCGCT GGGACGCCAC TTGTCCGAAG AATTCGATAT CGAACACCTT
TTTATCGATA TTCATAATCC GGTCTGA
|
|---|
| Protein sequence | MDRIELELYL NNTLETARFK DYCPNGLQVE GRRKIEKIAT GVTASVAFLE AALEWGADAV
LVHHGYFWRN EAPQITGRKY QRLKLLLAND LNLFAFHLPL DAHPELGNNA QLGQKLGLIG
DQRFGDGDLG WMATLPMPVT LEHFVAKVER TLGRTPLVLG DADMQLRRIA WCTGAAQSYF
DAAIDAGADV FLTGEVSESV THAAAESGVA FVAAGHHATE RYGIQALGRH LSEEFDIEHL
FIDIHNPV
|
|---|
| |