| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_0357 |
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| Symbol | |
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| ID | 4308796 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008390 |
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| Strand | - |
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| Start bp | 397065 |
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| End bp | 398270 |
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| Gene Length | 1206 bp |
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| Protein Length | 401 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 638148145 |
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| Product | peptidase S1 and S6, chymotrypsin/Hap |
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| Protein accession | YP_772251 |
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| Protein GI | 115350412 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0265] Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain |
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| TIGRFAM ID | [TIGR02037] periplasmic serine protease, Do/DeqQ family
[TIGR02038] periplasmic serine pepetdase DegS |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.12639 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTTAGAC GCTTCTGGCT GTTCTTCGCG CAGGCGGTGA CCGTACTGCT CGCGCTGATG
TTCATCGTCG TGACGCTCAA GCCGCAATGG CTGCAACGGC AAGGACAGCT CGGCAAGCAG
CTCGCCACGC CGATCGTTGC GTTGCGGGAA GTAGCGCCGG GCATCGGCGG AGCGCCGGCG
ACCACGTCGT ACGCGGAAGC CGCGCAAAAG GCGATGCCCG CCGTCGTCAA CGTATTCTCC
AGCAAGGACG GCTCGCTGCC GCCCGATCCG CGGGCGAAGG ATCCGCTGTT CCGCTATTTC
TTCGGCGACC GCAACGCACG CAAGCAGCAG GACGAACCGG CCGCCAACCT CGGCTCCGGC
GTCATCGTGA GCCCTGAAGG TTACATTCTA ACGAACCAGC ACGTCGTGGA CGGCGCCGAC
CAGATCGAAG TCGCGCTCGC CGACGGCCGC ACGGCCACCG CGAAGGTGAT CGGCAGCGAC
CCCGAGACCG ATCTCGCCGT CCTGAAGATC AACATGACGA ACCTGCCGAC GATCACGCTC
GGCCGTTCCG ACCAGTCGCG GGTCGGCGAC GTCGTCCTCG CGATCGGCAA CCCGTTCGGC
GTCGGCCAGA CGGTCACGAT GGGGATCATC AGCGCGCTCG GCCGCAATCA CCTCGGCATC
AACACCTTCG AGAACTTCAT CCAGACCGAT GCGCCGATCA ACCCCGGCAA CTCGGGCGGC
GCGCTGGTCG ACGTGAACGG CAACCTGCTC GGCATCAACA CGGCGATCTA TTCGCGCTCG
GGCGGCTCGC TCGGCATCGG CTTCGCGATC CCTGTGTCGA CCGCGCGCAC CGTGCTCGAA
AGCATCATCA CGACCGGCTC GGTCACGCGC GGCTGGATCG GCGTCGAGCC GCAGGACGTC
ACGCCGGAAA TCGCCGAGTC GTTCGGGCTC CAGCAGAAGA CGGGCGCGAT CGTCGCGGGC
GTGCTGCAGG GCGGTCCGGC AGACAAGGCC GGCATCAAGC CGGGCGACAT CCTCGTGAGC
GTGAACGGCG ACGAAATCAC CGACACCACA AAGCTGCTGA ACACCGTCGC GCAGATCAAG
CCGGGCACGT CGACCAAGGT GCACGTCGTG CGCAAGGGCA AGGAATTCGA CGTGAACGTC
GTGATCGGCA AGCGCCCGCC GCCGCCGAAG CAGGCGCTCG ACGAACAGGA CAGCGACAGC
GAGTGA
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| Protein sequence | MLRRFWLFFA QAVTVLLALM FIVVTLKPQW LQRQGQLGKQ LATPIVALRE VAPGIGGAPA
TTSYAEAAQK AMPAVVNVFS SKDGSLPPDP RAKDPLFRYF FGDRNARKQQ DEPAANLGSG
VIVSPEGYIL TNQHVVDGAD QIEVALADGR TATAKVIGSD PETDLAVLKI NMTNLPTITL
GRSDQSRVGD VVLAIGNPFG VGQTVTMGII SALGRNHLGI NTFENFIQTD APINPGNSGG
ALVDVNGNLL GINTAIYSRS GGSLGIGFAI PVSTARTVLE SIITTGSVTR GWIGVEPQDV
TPEIAESFGL QQKTGAIVAG VLQGGPADKA GIKPGDILVS VNGDEITDTT KLLNTVAQIK
PGTSTKVHVV RKGKEFDVNV VIGKRPPPPK QALDEQDSDS E
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