Gene Bamb_0355 details

Gene Information

• Locus tag: Bamb_0355
• Symbol: tatB
• ID: 4308794
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Burkholderia ambifaria AMMD
• Kingdom: Bacteria
• Replicon accession: NC_008390
• Strand: +
• Start bp: 395462
• End bp: 395992
• Gene Length: 531 bp
• Protein Length: 176 aa
• Translation table: 11
• GC content: 69%
• IMG OID: 638148143
• Product: sec-independent translocase
• Protein accession: YP_772249
• Protein GI: 115350410
• COG category: [U] Intracellular trafficking, secretion, and vesicular transport
• COG ID: [COG1826] Sec-independent protein secretion pathway components
• TIGRFAM ID: [TIGR01410] twin arginine-targeting protein translocase TatB

Plasmid Coverage information

• Num covering plasmid clones: 19
• Plasmid unclonability p-value: 0.843267
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCTGGATC TCGGTCTTTC GAAGATGGCG CTGATCGGCG TCGTCGCGCT CGTGGTGCTC 
GGCCCCGAGC GCCTGCCGCG CGTCGCCCGT ACGGCCGGCG CATTGTTTGG CCGCGCGCAG 
CGGTACATCA ACGACGTGAA GTCCGAGGTC TCGCGCGAAA TCGAACTCGA CGCGCTGCGG 
ACGATGAAGA CCGATTTCGA GTCGGCCGCG CGCAATGTCG AGACAACGAT TCACGACAAC 
CTGCGCGAGC ACGAGAAGGA ACTGAACGAC ACGTGGCATT CCGCGGTCGG CGGTCTTAAC 
GAAGGCTCGG TCGATGCCGG CACGTACGGC TCCGACACCC CCGCGGCGCC GTCGTGGCGC 
GGCAGTACGG CCGCGCTTGC GCGCAAGCGT CGCAACTGGC GTGTGAAGCA GGCGGCGATG 
CCTGTCTGGT ACAAGCGCGC GACGACCCGC CGCACGCACG TGCAGTCGGG CGCCGCGCGT 
GTCGCGCGCC ACCAGCCGGC CAGCCTGCGC CGGCCGACGC GCTTTCTCTG A 

 

Protein sequence

MLDLGLSKMA LIGVVALVVL GPERLPRVAR TAGALFGRAQ RYINDVKSEV SREIELDALR 
TMKTDFESAA RNVETTIHDN LREHEKELND TWHSAVGGLN EGSVDAGTYG SDTPAAPSWR 
GSTAALARKR RNWRVKQAAM PVWYKRATTR RTHVQSGAAR VARHQPASLR RPTRFL