| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_0335 |
|---|
| Symbol | |
|---|
| ID | 4309995 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria AMMD |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008390 |
|---|
| Strand | + |
|---|
| Start bp | 380920 |
|---|
| End bp | 381885 |
|---|
| Gene Length | 966 bp |
|---|
| Protein Length | 321 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 638148123 |
|---|
| Product | VacJ family lipoprotein |
|---|
| Protein accession | YP_772229 |
|---|
| Protein GI | 115350390 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG2853] Surface lipoprotein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCAGACGA TCCGCATCAG GCACGCCGCG CTCGCAGTGG CGGCAGTCGC CGCGTTGAGC
GGTTGCGCGA CCGTACAGAC GCCGACCAAG GGCGATCCGC TCGAAGGTTT CAACCGGTCG
ATGTACAAGT TCAACGACAC GGTCGACACG TATGCGCTGA AGCCGGTCGC GAAGGGCTAC
CAGTACGTGG TGCCGCAGCC GGTGCGCGAC AGCGTGACGA ACTTCTTCTC GAACATCGGC
GACGTCTACA TCGCGGCGAA CAACATCGTG CAGCTGCGGA TCGCGGACGG CGTCGGCGAC
ATCATGCGCG TCGTGATCAA CACGGTGTTC GGCGTCGGCG GCCTGTTCGA CGTCGCGACG
ATCGCGAAAC TGCCGAAGCA CACGGCCGAC TTCGGGATCA CGATGGGCCG CTACGGCATG
CCGTCGGGCC CGTACCTCGT GCTGCCGCTG CTCGGCCCGA GCACGCTGCG CGACACGGCC
GGCCTCGGCG TCGACTACGT CGGCAACCCG CTCACCTACG TGAAGCCGGA CGGCCTGAGC
TGGGGCCTGT TCGGCGTGAA CCTCGTCAAC ACGCGTGCGA ACCTGCTCGG CGCGGGCGAC
GTGCTGGATG CCGCGGCGCT CGACAAGTAT TCGTTCGTAC GCAACGCGTA CCTGCAGCGC
CGCCAGATGC TGATCAGCAA TGCGCGGGGC GAGGCCGCGG CGACGTCGAG CAACGACGCG
CTGCCGAAGT ACGAGCTGCC GGACGACGGC GCGGCACCGG CAGCAGCCGG CGCGGCCGGT
ACGGCGGGCG CGGCAGCGGT GGGTGGCGCG ACGGCGCCGG CAGGCGCATC GGGCGCGGCG
GTGCCCGCAC CGGCGTCGGG TACGCCCGAA GCGCCGAACC CGGCCAGCGA AACGAACGTG
CCGGCGATGC AGGTTGCGCC GCCGTCGCCG GGCGGGTTCC GCTTCCCGAG CATCCGGCTG
CACTGA
|
|---|
| Protein sequence | MQTIRIRHAA LAVAAVAALS GCATVQTPTK GDPLEGFNRS MYKFNDTVDT YALKPVAKGY
QYVVPQPVRD SVTNFFSNIG DVYIAANNIV QLRIADGVGD IMRVVINTVF GVGGLFDVAT
IAKLPKHTAD FGITMGRYGM PSGPYLVLPL LGPSTLRDTA GLGVDYVGNP LTYVKPDGLS
WGLFGVNLVN TRANLLGAGD VLDAAALDKY SFVRNAYLQR RQMLISNARG EAAATSSNDA
LPKYELPDDG AAPAAAGAAG TAGAAAVGGA TAPAGASGAA VPAPASGTPE APNPASETNV
PAMQVAPPSP GGFRFPSIRL H
|
|---|
| |